RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 A0A1B0GU33 70 aa3.78□□□□□ -1.8
CHD2-206ENST00000625990 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
CHD2-206ENST00000625990 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
CHD2-206ENST00000625990 MT1XP80297 61 aa3.75□□□□□ -1.81
CHD2-206ENST00000625990 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CHD2-206ENST00000625990 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
CHD2-206ENST00000625990 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
CHD2-206ENST00000625990 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
CHD2-206ENST00000625990 ACYP2P14621 99 aa3.71□□□□□ -1.82
CHD2-206ENST00000625990 H0YAA0 97 aa3.7□□□□□ -1.82
CHD2-206ENST00000625990 SPRR2EP22531 72 aa3.68□□□□□ -1.82
CHD2-206ENST00000625990 SPRR2BP35325 72 aa3.68□□□□□ -1.82
CHD2-206ENST00000625990 SPRR2AP35326 72 aa3.68□□□□□ -1.82
CHD2-206ENST00000625990 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
CHD2-206ENST00000625990 M0QZ58 72 aa3.65□□□□□ -1.83
CHD2-206ENST00000625990 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
CHD2-206ENST00000625990 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
CHD2-206ENST00000625990 R4GN34 69 aa3.63□□□□□ -1.83
CHD2-206ENST00000625990 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
CHD2-206ENST00000625990 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
CHD2-206ENST00000625990 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
CHD2-206ENST00000625990 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
CHD2-206ENST00000625990 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
CHD2-206ENST00000625990 SPRR2DP22532 72 aa3.55□□□□□ -1.84
CHD2-206ENST00000625990 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
CHD2-206ENST00000625990 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
CHD2-206ENST00000625990 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
CHD2-206ENST00000625990 INE1O15225 51 aa3.45□□□□□ -1.86
CHD2-206ENST00000625990 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
CHD2-206ENST00000625990 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
CHD2-206ENST00000625990 A0A0D9SG42 100 aa3.35□□□□□ -1.87
CHD2-206ENST00000625990 MT1EP04732 61 aa3.32□□□□□ -1.88
CHD2-206ENST00000625990 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
CHD2-206ENST00000625990 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
CHD2-206ENST00000625990 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
CHD2-206ENST00000625990 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
CHD2-206ENST00000625990 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
CHD2-206ENST00000625990 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
CHD2-206ENST00000625990 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
CHD2-206ENST00000625990 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
CHD2-206ENST00000625990 MT4P47944 62 aa3.17□□□□□ -1.9
CHD2-206ENST00000625990 MT1MQ8N339 61 aa3.17□□□□□ -1.9
CHD2-206ENST00000625990 MT1LQ93083 61 aa3.16□□□□□ -1.9
CHD2-206ENST00000625990 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
CHD2-206ENST00000625990 MT1GP13640 62 aa3.13□□□□□ -1.91
CHD2-206ENST00000625990 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
CHD2-206ENST00000625990 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
CHD2-206ENST00000625990 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CHD2-206ENST00000625990 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
CHD2-206ENST00000625990 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
CHD2-206ENST00000625990 TNP1P09430 55 aa3.01□□□□□ -1.93
CHD2-206ENST00000625990 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
CHD2-206ENST00000625990 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
CHD2-206ENST00000625990 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CHD2-206ENST00000625990 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CHD2-206ENST00000625990 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
CHD2-206ENST00000625990 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CHD2-206ENST00000625990 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
CHD2-206ENST00000625990 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
CHD2-206ENST00000625990 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
CHD2-206ENST00000625990 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
CHD2-206ENST00000625990 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
CHD2-206ENST00000625990 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
CHD2-206ENST00000625990 MT1AP04731 61 aa2.65□□□□□ -1.99
CHD2-206ENST00000625990 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
CHD2-206ENST00000625990 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
CHD2-206ENST00000625990 KRTAP5-8O75690 187 aa2.57□□□□□ -2
CHD2-206ENST00000625990 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
CHD2-206ENST00000625990 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CHD2-206ENST00000625990 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CHD2-206ENST00000625990 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CHD2-206ENST00000625990 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CHD2-206ENST00000625990 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
CHD2-206ENST00000625990 PRM1P04553 51 aa1.84□□□□□ -2.11
CHD2-206ENST00000625990 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
CHD2-206ENST00000625990 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
CHD2-206ENST00000625990 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CHD2-206ENST00000625990 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms