RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 KRTAP2-2Q9BYT5 123 aa6.6□□□□□ -1.35
LITAF-220ENST00000620789 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
LITAF-220ENST00000620789 MT1GP13640 62 aa6.55□□□□□ -1.36
LITAF-220ENST00000620789 MT1LQ93083 61 aa6.53□□□□□ -1.36
LITAF-220ENST00000620789 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
LITAF-220ENST00000620789 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
LITAF-220ENST00000620789 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
LITAF-220ENST00000620789 MT1MQ8N339 61 aa6.44□□□□□ -1.38
LITAF-220ENST00000620789 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
LITAF-220ENST00000620789 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
LITAF-220ENST00000620789 ROMO1P60602 79 aa6.39□□□□□ -1.39
LITAF-220ENST00000620789 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
LITAF-220ENST00000620789 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
LITAF-220ENST00000620789 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
LITAF-220ENST00000620789 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
LITAF-220ENST00000620789 BRK1Q8WUW1 75 aa6.12□□□□□ -1.43
LITAF-220ENST00000620789 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
LITAF-220ENST00000620789 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
LITAF-220ENST00000620789 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
LITAF-220ENST00000620789 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
LITAF-220ENST00000620789 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
LITAF-220ENST00000620789 H3BS24 57 aa5.92□□□□□ -1.46
LITAF-220ENST00000620789 MT4P47944 62 aa5.92□□□□□ -1.46
LITAF-220ENST00000620789 HMCN1Q96RW7 5635 aa5.89□□□□□ -1.47
LITAF-220ENST00000620789 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
LITAF-220ENST00000620789 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
LITAF-220ENST00000620789 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
LITAF-220ENST00000620789 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
LITAF-220ENST00000620789 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
LITAF-220ENST00000620789 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
LITAF-220ENST00000620789 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
LITAF-220ENST00000620789 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
LITAF-220ENST00000620789 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
LITAF-220ENST00000620789 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
LITAF-220ENST00000620789 MT1AP04731 61 aa5.56□□□□□ -1.52
LITAF-220ENST00000620789 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
LITAF-220ENST00000620789 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
LITAF-220ENST00000620789 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
LITAF-220ENST00000620789 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
LITAF-220ENST00000620789 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
LITAF-220ENST00000620789 KRTAP5-10Q6L8G5 202 aa5.39□□□□□ -1.55
LITAF-220ENST00000620789 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
LITAF-220ENST00000620789 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
LITAF-220ENST00000620789 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
LITAF-220ENST00000620789 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
LITAF-220ENST00000620789 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
LITAF-220ENST00000620789 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
LITAF-220ENST00000620789 MT3P25713 68 aa5.07□□□□□ -1.6
LITAF-220ENST00000620789 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
LITAF-220ENST00000620789 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
LITAF-220ENST00000620789 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
LITAF-220ENST00000620789 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
LITAF-220ENST00000620789 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
LITAF-220ENST00000620789 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
LITAF-220ENST00000620789 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
LITAF-220ENST00000620789 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
LITAF-220ENST00000620789 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
LITAF-220ENST00000620789 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
LITAF-220ENST00000620789 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
LITAF-220ENST00000620789 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
LITAF-220ENST00000620789 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
LITAF-220ENST00000620789 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
LITAF-220ENST00000620789 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
LITAF-220ENST00000620789 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
LITAF-220ENST00000620789 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
LITAF-220ENST00000620789 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
LITAF-220ENST00000620789 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
LITAF-220ENST00000620789 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
LITAF-220ENST00000620789 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
LITAF-220ENST00000620789 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
LITAF-220ENST00000620789 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
LITAF-220ENST00000620789 PRM1P04553 51 aa3.28□□□□□ -1.88
LITAF-220ENST00000620789 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
LITAF-220ENST00000620789 INE1O15225 51 aa3.2□□□□□ -1.9
LITAF-220ENST00000620789 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
LITAF-220ENST00000620789 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
LITAF-220ENST00000620789 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 135.9 ms