RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
GAPDH-211ENST00000619601 UQCR11O14957 56 aa4.28□□□□□ -1.72
GAPDH-211ENST00000619601 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
GAPDH-211ENST00000619601 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
GAPDH-211ENST00000619601 A0A1B0GU33 70 aa4.25□□□□□ -1.73
GAPDH-211ENST00000619601 A0A1B0GU69 56 aa4.25□□□□□ -1.73
GAPDH-211ENST00000619601 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
GAPDH-211ENST00000619601 A0A0D9SG42 100 aa4.24□□□□□ -1.73
GAPDH-211ENST00000619601 ROMO1P60602 79 aa4.21□□□□□ -1.74
GAPDH-211ENST00000619601 SPINT4Q6UDR6 99 aa4.19□□□□□ -1.74
GAPDH-211ENST00000619601 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
GAPDH-211ENST00000619601 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
GAPDH-211ENST00000619601 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
GAPDH-211ENST00000619601 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
GAPDH-211ENST00000619601 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
GAPDH-211ENST00000619601 MT1EP04732 61 aa4.08□□□□□ -1.76
GAPDH-211ENST00000619601 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
GAPDH-211ENST00000619601 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
GAPDH-211ENST00000619601 K7ERS5 55 aa4.05□□□□□ -1.76
GAPDH-211ENST00000619601 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
GAPDH-211ENST00000619601 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
GAPDH-211ENST00000619601 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
GAPDH-211ENST00000619601 TNP1P09430 55 aa4□□□□□ -1.77
GAPDH-211ENST00000619601 MT1GP13640 62 aa3.98□□□□□ -1.77
GAPDH-211ENST00000619601 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
GAPDH-211ENST00000619601 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
GAPDH-211ENST00000619601 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
GAPDH-211ENST00000619601 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
GAPDH-211ENST00000619601 MT1LQ93083 61 aa3.9□□□□□ -1.79
GAPDH-211ENST00000619601 MT1MQ8N339 61 aa3.88□□□□□ -1.79
GAPDH-211ENST00000619601 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
GAPDH-211ENST00000619601 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
GAPDH-211ENST00000619601 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
GAPDH-211ENST00000619601 MT4P47944 62 aa3.85□□□□□ -1.79
GAPDH-211ENST00000619601 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
GAPDH-211ENST00000619601 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
GAPDH-211ENST00000619601 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
GAPDH-211ENST00000619601 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
GAPDH-211ENST00000619601 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
GAPDH-211ENST00000619601 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
GAPDH-211ENST00000619601 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
GAPDH-211ENST00000619601 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
GAPDH-211ENST00000619601 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
GAPDH-211ENST00000619601 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
GAPDH-211ENST00000619601 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
GAPDH-211ENST00000619601 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
GAPDH-211ENST00000619601 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
GAPDH-211ENST00000619601 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
GAPDH-211ENST00000619601 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
GAPDH-211ENST00000619601 INE1O15225 51 aa3.35□□□□□ -1.87
GAPDH-211ENST00000619601 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
GAPDH-211ENST00000619601 MT1AP04731 61 aa3.33□□□□□ -1.88
GAPDH-211ENST00000619601 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
GAPDH-211ENST00000619601 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
GAPDH-211ENST00000619601 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
GAPDH-211ENST00000619601 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
GAPDH-211ENST00000619601 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.89
GAPDH-211ENST00000619601 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
GAPDH-211ENST00000619601 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
GAPDH-211ENST00000619601 MT3P25713 68 aa3.07□□□□□ -1.92
GAPDH-211ENST00000619601 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
GAPDH-211ENST00000619601 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
GAPDH-211ENST00000619601 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
GAPDH-211ENST00000619601 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
GAPDH-211ENST00000619601 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
GAPDH-211ENST00000619601 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
GAPDH-211ENST00000619601 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
GAPDH-211ENST00000619601 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
GAPDH-211ENST00000619601 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
GAPDH-211ENST00000619601 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
GAPDH-211ENST00000619601 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
GAPDH-211ENST00000619601 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
GAPDH-211ENST00000619601 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
GAPDH-211ENST00000619601 PRM1P04553 51 aa2.03□□□□□ -2.08
GAPDH-211ENST00000619601 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
GAPDH-211ENST00000619601 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
GAPDH-211ENST00000619601 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms