RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 LCE1EQ5T753 118 aa2.57□□□□□ -2
CBWD3-215ENST00000619322 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CBWD3-215ENST00000619322 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CBWD3-215ENST00000619322 K7ERS5 55 aa2.55□□□□□ -2
CBWD3-215ENST00000619322 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CBWD3-215ENST00000619322 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
CBWD3-215ENST00000619322 MT1BP07438 61 aa2.49□□□□□ -2.01
CBWD3-215ENST00000619322 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
CBWD3-215ENST00000619322 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
CBWD3-215ENST00000619322 NEBP20929 6669 aa2.48□□□□□ -2.01
CBWD3-215ENST00000619322 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
CBWD3-215ENST00000619322 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
CBWD3-215ENST00000619322 S4R3F8 94 aa2.45□□□□□ -2.02
CBWD3-215ENST00000619322 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
CBWD3-215ENST00000619322 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
CBWD3-215ENST00000619322 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
CBWD3-215ENST00000619322 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
CBWD3-215ENST00000619322 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
CBWD3-215ENST00000619322 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
CBWD3-215ENST00000619322 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
CBWD3-215ENST00000619322 M0R2T5 61 aa2.35□□□□□ -2.03
CBWD3-215ENST00000619322 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
CBWD3-215ENST00000619322 PRO2289Q9P1D8 64 aa2.32□□□□□ -2.04
CBWD3-215ENST00000619322 M0QZ58 72 aa2.32□□□□□ -2.04
CBWD3-215ENST00000619322 MT1XP80297 61 aa2.29□□□□□ -2.04
CBWD3-215ENST00000619322 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
CBWD3-215ENST00000619322 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
CBWD3-215ENST00000619322 R4GN34 69 aa2.24□□□□□ -2.05
CBWD3-215ENST00000619322 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
CBWD3-215ENST00000619322 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
CBWD3-215ENST00000619322 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
CBWD3-215ENST00000619322 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
CBWD3-215ENST00000619322 SPRR2EP22531 72 aa2.14□□□□□ -2.07
CBWD3-215ENST00000619322 SPRR2BP35325 72 aa2.14□□□□□ -2.07
CBWD3-215ENST00000619322 SPRR2AP35326 72 aa2.14□□□□□ -2.07
CBWD3-215ENST00000619322 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
CBWD3-215ENST00000619322 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
CBWD3-215ENST00000619322 SPRR2DP22532 72 aa2.11□□□□□ -2.07
CBWD3-215ENST00000619322 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
CBWD3-215ENST00000619322 KMT2DO14686 5537 aa2.11□□□□□ -2.07
CBWD3-215ENST00000619322 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
CBWD3-215ENST00000619322 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
CBWD3-215ENST00000619322 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
CBWD3-215ENST00000619322 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
CBWD3-215ENST00000619322 MT1EP04732 61 aa2.08□□□□□ -2.08
CBWD3-215ENST00000619322 MT1GP13640 62 aa2.08□□□□□ -2.08
CBWD3-215ENST00000619322 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
CBWD3-215ENST00000619322 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
CBWD3-215ENST00000619322 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
CBWD3-215ENST00000619322 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
CBWD3-215ENST00000619322 SPRR2FQ96RM1 72 aa2.02□□□□□ -2.09
CBWD3-215ENST00000619322 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
CBWD3-215ENST00000619322 FSIP2Q5CZC0 6907 aa2.01□□□□□ -2.09
CBWD3-215ENST00000619322 TNP1P09430 55 aa2□□□□□ -2.09
CBWD3-215ENST00000619322 MT1MQ8N339 61 aa1.99□□□□□ -2.09
CBWD3-215ENST00000619322 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
CBWD3-215ENST00000619322 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
CBWD3-215ENST00000619322 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
CBWD3-215ENST00000619322 MT1LQ93083 61 aa1.94□□□□□ -2.1
CBWD3-215ENST00000619322 INE1O15225 51 aa1.92□□□□□ -2.1
CBWD3-215ENST00000619322 MUC5ACP98088 5654 aa1.9□□□□□ -2.1
CBWD3-215ENST00000619322 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
CBWD3-215ENST00000619322 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
CBWD3-215ENST00000619322 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
CBWD3-215ENST00000619322 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
CBWD3-215ENST00000619322 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CBWD3-215ENST00000619322 MT1AP04731 61 aa1.77□□□□□ -2.13
CBWD3-215ENST00000619322 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
CBWD3-215ENST00000619322 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
CBWD3-215ENST00000619322 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
CBWD3-215ENST00000619322 MT4P47944 62 aa1.56□□□□□ -2.16
CBWD3-215ENST00000619322 PRM1P04553 51 aa1.55□□□□□ -2.16
CBWD3-215ENST00000619322 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
CBWD3-215ENST00000619322 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
CBWD3-215ENST00000619322 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
CBWD3-215ENST00000619322 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CBWD3-215ENST00000619322 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.24
CBWD3-215ENST00000619322 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 41.9 ms