RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
RPP40-207ENST00000618533 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
RPP40-207ENST00000618533 A6NED7 52 aa5.82□□□□□ -1.48
RPP40-207ENST00000618533 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
RPP40-207ENST00000618533 SPRR2DP22532 72 aa5.81□□□□□ -1.48
RPP40-207ENST00000618533 MT1EP04732 61 aa5.79□□□□□ -1.48
RPP40-207ENST00000618533 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
RPP40-207ENST00000618533 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
RPP40-207ENST00000618533 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
RPP40-207ENST00000618533 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
RPP40-207ENST00000618533 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
RPP40-207ENST00000618533 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.5
RPP40-207ENST00000618533 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
RPP40-207ENST00000618533 H3BS24 57 aa5.69□□□□□ -1.5
RPP40-207ENST00000618533 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
RPP40-207ENST00000618533 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
RPP40-207ENST00000618533 MT1GP13640 62 aa5.63□□□□□ -1.51
RPP40-207ENST00000618533 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
RPP40-207ENST00000618533 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
RPP40-207ENST00000618533 MT1LQ93083 61 aa5.57□□□□□ -1.52
RPP40-207ENST00000618533 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
RPP40-207ENST00000618533 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
RPP40-207ENST00000618533 ROMO1P60602 79 aa5.49□□□□□ -1.53
RPP40-207ENST00000618533 MT1MQ8N339 61 aa5.49□□□□□ -1.53
RPP40-207ENST00000618533 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
RPP40-207ENST00000618533 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
RPP40-207ENST00000618533 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
RPP40-207ENST00000618533 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
RPP40-207ENST00000618533 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
RPP40-207ENST00000618533 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
RPP40-207ENST00000618533 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
RPP40-207ENST00000618533 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
RPP40-207ENST00000618533 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
RPP40-207ENST00000618533 MT4P47944 62 aa5.02□□□□□ -1.61
RPP40-207ENST00000618533 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
RPP40-207ENST00000618533 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
RPP40-207ENST00000618533 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
RPP40-207ENST00000618533 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
RPP40-207ENST00000618533 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
RPP40-207ENST00000618533 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
RPP40-207ENST00000618533 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
RPP40-207ENST00000618533 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
RPP40-207ENST00000618533 MT1AP04731 61 aa4.77□□□□□ -1.65
RPP40-207ENST00000618533 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
RPP40-207ENST00000618533 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
RPP40-207ENST00000618533 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
RPP40-207ENST00000618533 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
RPP40-207ENST00000618533 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
RPP40-207ENST00000618533 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
RPP40-207ENST00000618533 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
RPP40-207ENST00000618533 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
RPP40-207ENST00000618533 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
RPP40-207ENST00000618533 MT3P25713 68 aa4.36□□□□□ -1.71
RPP40-207ENST00000618533 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
RPP40-207ENST00000618533 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
RPP40-207ENST00000618533 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
RPP40-207ENST00000618533 LUZP6Q538Z0 58 aa4□□□□□ -1.77
RPP40-207ENST00000618533 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
RPP40-207ENST00000618533 MUC5ACP98088 5654 aa4□□□□□ -1.77
RPP40-207ENST00000618533 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
RPP40-207ENST00000618533 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
RPP40-207ENST00000618533 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
RPP40-207ENST00000618533 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
RPP40-207ENST00000618533 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
RPP40-207ENST00000618533 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
RPP40-207ENST00000618533 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
RPP40-207ENST00000618533 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
RPP40-207ENST00000618533 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
RPP40-207ENST00000618533 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
RPP40-207ENST00000618533 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
RPP40-207ENST00000618533 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
RPP40-207ENST00000618533 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
RPP40-207ENST00000618533 INE1O15225 51 aa2.81□□□□□ -1.96
RPP40-207ENST00000618533 PRM1P04553 51 aa2.79□□□□□ -1.96
RPP40-207ENST00000618533 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
RPP40-207ENST00000618533 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
RPP40-207ENST00000618533 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 71.7 ms