RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
TARDBP-219ENST00000617757 ROMO1P60602 79 aa3.21□□□□□ -1.9
TARDBP-219ENST00000617757 TNP1P09430 55 aa3.2□□□□□ -1.9
TARDBP-219ENST00000617757 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
TARDBP-219ENST00000617757 KMT2DO14686 5537 aa3.17□□□□□ -1.9
TARDBP-219ENST00000617757 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
TARDBP-219ENST00000617757 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
TARDBP-219ENST00000617757 NEBP20929 6669 aa3.12□□□□□ -1.91
TARDBP-219ENST00000617757 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
TARDBP-219ENST00000617757 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
TARDBP-219ENST00000617757 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
TARDBP-219ENST00000617757 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
TARDBP-219ENST00000617757 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
TARDBP-219ENST00000617757 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
TARDBP-219ENST00000617757 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
TARDBP-219ENST00000617757 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
TARDBP-219ENST00000617757 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
TARDBP-219ENST00000617757 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
TARDBP-219ENST00000617757 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
TARDBP-219ENST00000617757 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
TARDBP-219ENST00000617757 MT1EP04732 61 aa2.96□□□□□ -1.94
TARDBP-219ENST00000617757 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
TARDBP-219ENST00000617757 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
TARDBP-219ENST00000617757 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
TARDBP-219ENST00000617757 MT1LQ93083 61 aa2.88□□□□□ -1.95
TARDBP-219ENST00000617757 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
TARDBP-219ENST00000617757 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
TARDBP-219ENST00000617757 SPRR2EP22531 72 aa2.87□□□□□ -1.95
TARDBP-219ENST00000617757 SPRR2BP35325 72 aa2.87□□□□□ -1.95
TARDBP-219ENST00000617757 SPRR2AP35326 72 aa2.87□□□□□ -1.95
TARDBP-219ENST00000617757 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
TARDBP-219ENST00000617757 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TARDBP-219ENST00000617757 MT1GP13640 62 aa2.84□□□□□ -1.95
TARDBP-219ENST00000617757 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
TARDBP-219ENST00000617757 MT1MQ8N339 61 aa2.8□□□□□ -1.96
TARDBP-219ENST00000617757 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
TARDBP-219ENST00000617757 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
TARDBP-219ENST00000617757 SPRR2DP22532 72 aa2.77□□□□□ -1.97
TARDBP-219ENST00000617757 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
TARDBP-219ENST00000617757 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
TARDBP-219ENST00000617757 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
TARDBP-219ENST00000617757 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
TARDBP-219ENST00000617757 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
TARDBP-219ENST00000617757 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
TARDBP-219ENST00000617757 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
TARDBP-219ENST00000617757 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
TARDBP-219ENST00000617757 MT3P25713 68 aa2.49□□□□□ -2.01
TARDBP-219ENST00000617757 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
TARDBP-219ENST00000617757 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
TARDBP-219ENST00000617757 MT1AP04731 61 aa2.45□□□□□ -2.02
TARDBP-219ENST00000617757 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
TARDBP-219ENST00000617757 MT4P47944 62 aa2.41□□□□□ -2.02
TARDBP-219ENST00000617757 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TARDBP-219ENST00000617757 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
TARDBP-219ENST00000617757 INE1O15225 51 aa2.39□□□□□ -2.03
TARDBP-219ENST00000617757 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
TARDBP-219ENST00000617757 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
TARDBP-219ENST00000617757 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
TARDBP-219ENST00000617757 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
TARDBP-219ENST00000617757 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
TARDBP-219ENST00000617757 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
TARDBP-219ENST00000617757 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
TARDBP-219ENST00000617757 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
TARDBP-219ENST00000617757 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
TARDBP-219ENST00000617757 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
TARDBP-219ENST00000617757 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
TARDBP-219ENST00000617757 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TARDBP-219ENST00000617757 MUC5ACP98088 5654 aa2□□□□□ -2.09
TARDBP-219ENST00000617757 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
TARDBP-219ENST00000617757 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
TARDBP-219ENST00000617757 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
TARDBP-219ENST00000617757 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
TARDBP-219ENST00000617757 PRM1P04553 51 aa1.67□□□□□ -2.14
TARDBP-219ENST00000617757 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
TARDBP-219ENST00000617757 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
TARDBP-219ENST00000617757 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
TARDBP-219ENST00000617757 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
TARDBP-219ENST00000617757 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 675.6 ms