RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-222ENST00000616271 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
CADM1-222ENST00000616271 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
CADM1-222ENST00000616271 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
CADM1-222ENST00000616271 MT1GP13640 62 aa6.59□□□□□ -1.35
CADM1-222ENST00000616271 MT1LQ93083 61 aa6.57□□□□□ -1.36
CADM1-222ENST00000616271 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
CADM1-222ENST00000616271 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CADM1-222ENST00000616271 MT1MQ8N339 61 aa6.48□□□□□ -1.37
CADM1-222ENST00000616271 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
CADM1-222ENST00000616271 ROMO1P60602 79 aa6.46□□□□□ -1.38
CADM1-222ENST00000616271 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
CADM1-222ENST00000616271 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
CADM1-222ENST00000616271 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
CADM1-222ENST00000616271 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
CADM1-222ENST00000616271 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
CADM1-222ENST00000616271 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
CADM1-222ENST00000616271 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
CADM1-222ENST00000616271 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
CADM1-222ENST00000616271 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
CADM1-222ENST00000616271 KRTAP5-4Q6L8H1 288 aa6.02□□□□□ -1.45
CADM1-222ENST00000616271 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
CADM1-222ENST00000616271 MT4P47944 62 aa5.93□□□□□ -1.46
CADM1-222ENST00000616271 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
CADM1-222ENST00000616271 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
CADM1-222ENST00000616271 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
CADM1-222ENST00000616271 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
CADM1-222ENST00000616271 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
CADM1-222ENST00000616271 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
CADM1-222ENST00000616271 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
CADM1-222ENST00000616271 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
CADM1-222ENST00000616271 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
CADM1-222ENST00000616271 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
CADM1-222ENST00000616271 MT1AP04731 61 aa5.61□□□□□ -1.51
CADM1-222ENST00000616271 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
CADM1-222ENST00000616271 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
CADM1-222ENST00000616271 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
CADM1-222ENST00000616271 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
CADM1-222ENST00000616271 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
CADM1-222ENST00000616271 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
CADM1-222ENST00000616271 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
CADM1-222ENST00000616271 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
CADM1-222ENST00000616271 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
CADM1-222ENST00000616271 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
CADM1-222ENST00000616271 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
CADM1-222ENST00000616271 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
CADM1-222ENST00000616271 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
CADM1-222ENST00000616271 MT3P25713 68 aa5.11□□□□□ -1.59
CADM1-222ENST00000616271 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
CADM1-222ENST00000616271 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
CADM1-222ENST00000616271 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
CADM1-222ENST00000616271 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
CADM1-222ENST00000616271 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
CADM1-222ENST00000616271 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
CADM1-222ENST00000616271 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
CADM1-222ENST00000616271 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
CADM1-222ENST00000616271 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
CADM1-222ENST00000616271 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CADM1-222ENST00000616271 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
CADM1-222ENST00000616271 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
CADM1-222ENST00000616271 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
CADM1-222ENST00000616271 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
CADM1-222ENST00000616271 H3BS24 57 aa4.25□□□□□ -1.73
CADM1-222ENST00000616271 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
CADM1-222ENST00000616271 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
CADM1-222ENST00000616271 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
CADM1-222ENST00000616271 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CADM1-222ENST00000616271 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
CADM1-222ENST00000616271 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
CADM1-222ENST00000616271 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
CADM1-222ENST00000616271 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
CADM1-222ENST00000616271 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
CADM1-222ENST00000616271 PRM1P04553 51 aa3.31□□□□□ -1.88
CADM1-222ENST00000616271 INE1O15225 51 aa3.27□□□□□ -1.89
CADM1-222ENST00000616271 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CADM1-222ENST00000616271 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CADM1-222ENST00000616271 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
CADM1-222ENST00000616271 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms