RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
PCDH9-205ENST00000614931 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
PCDH9-205ENST00000614931 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
PCDH9-205ENST00000614931 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
PCDH9-205ENST00000614931 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
PCDH9-205ENST00000614931 SPRR2DP22532 72 aa3.02□□□□□ -1.93
PCDH9-205ENST00000614931 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
PCDH9-205ENST00000614931 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
PCDH9-205ENST00000614931 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
PCDH9-205ENST00000614931 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
PCDH9-205ENST00000614931 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
PCDH9-205ENST00000614931 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
PCDH9-205ENST00000614931 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
PCDH9-205ENST00000614931 MT1EP04732 61 aa2.96□□□□□ -1.94
PCDH9-205ENST00000614931 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
PCDH9-205ENST00000614931 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
PCDH9-205ENST00000614931 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
PCDH9-205ENST00000614931 PP632Q6XCG6 107 aa2.93□□□□□ -1.94
PCDH9-205ENST00000614931 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
PCDH9-205ENST00000614931 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.95
PCDH9-205ENST00000614931 MT1LQ93083 61 aa2.88□□□□□ -1.95
PCDH9-205ENST00000614931 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
PCDH9-205ENST00000614931 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
PCDH9-205ENST00000614931 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
PCDH9-205ENST00000614931 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
PCDH9-205ENST00000614931 MT1MQ8N339 61 aa2.8□□□□□ -1.96
PCDH9-205ENST00000614931 MT1GP13640 62 aa2.79□□□□□ -1.96
PCDH9-205ENST00000614931 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
PCDH9-205ENST00000614931 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
PCDH9-205ENST00000614931 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
PCDH9-205ENST00000614931 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
PCDH9-205ENST00000614931 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
PCDH9-205ENST00000614931 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
PCDH9-205ENST00000614931 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
PCDH9-205ENST00000614931 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
PCDH9-205ENST00000614931 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
PCDH9-205ENST00000614931 MT4P47944 62 aa2.63□□□□□ -1.99
PCDH9-205ENST00000614931 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
PCDH9-205ENST00000614931 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
PCDH9-205ENST00000614931 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
PCDH9-205ENST00000614931 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
PCDH9-205ENST00000614931 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
PCDH9-205ENST00000614931 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
PCDH9-205ENST00000614931 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
PCDH9-205ENST00000614931 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
PCDH9-205ENST00000614931 MT1AP04731 61 aa2.45□□□□□ -2.02
PCDH9-205ENST00000614931 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
PCDH9-205ENST00000614931 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
PCDH9-205ENST00000614931 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
PCDH9-205ENST00000614931 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
PCDH9-205ENST00000614931 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
PCDH9-205ENST00000614931 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
PCDH9-205ENST00000614931 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PCDH9-205ENST00000614931 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
PCDH9-205ENST00000614931 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
PCDH9-205ENST00000614931 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
PCDH9-205ENST00000614931 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PCDH9-205ENST00000614931 MT3P25713 68 aa2.18□□□□□ -2.06
PCDH9-205ENST00000614931 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
PCDH9-205ENST00000614931 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
PCDH9-205ENST00000614931 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
PCDH9-205ENST00000614931 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
PCDH9-205ENST00000614931 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
PCDH9-205ENST00000614931 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
PCDH9-205ENST00000614931 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
PCDH9-205ENST00000614931 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
PCDH9-205ENST00000614931 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
PCDH9-205ENST00000614931 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
PCDH9-205ENST00000614931 INE1O15225 51 aa1.82□□□□□ -2.12
PCDH9-205ENST00000614931 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
PCDH9-205ENST00000614931 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
PCDH9-205ENST00000614931 PRM1P04553 51 aa1.66□□□□□ -2.14
PCDH9-205ENST00000614931 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PCDH9-205ENST00000614931 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
PCDH9-205ENST00000614931 KRTAP4-4Q9BYR3 166 aa1.44□□□□□ -2.18
PCDH9-205ENST00000614931 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
PCDH9-205ENST00000614931 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
PCDH9-205ENST00000614931 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms