RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
CLTCL1-207ENST00000611723 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
CLTCL1-207ENST00000611723 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
CLTCL1-207ENST00000611723 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
CLTCL1-207ENST00000611723 SPRR2DP22532 72 aa5.95□□□□□ -1.46
CLTCL1-207ENST00000611723 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
CLTCL1-207ENST00000611723 MT1EP04732 61 aa5.87□□□□□ -1.47
CLTCL1-207ENST00000611723 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
CLTCL1-207ENST00000611723 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
CLTCL1-207ENST00000611723 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
CLTCL1-207ENST00000611723 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
CLTCL1-207ENST00000611723 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
CLTCL1-207ENST00000611723 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
CLTCL1-207ENST00000611723 MT1LQ93083 61 aa5.71□□□□□ -1.5
CLTCL1-207ENST00000611723 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CLTCL1-207ENST00000611723 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
CLTCL1-207ENST00000611723 MT1GP13640 62 aa5.65□□□□□ -1.5
CLTCL1-207ENST00000611723 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
CLTCL1-207ENST00000611723 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
CLTCL1-207ENST00000611723 MT1MQ8N339 61 aa5.55□□□□□ -1.52
CLTCL1-207ENST00000611723 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
CLTCL1-207ENST00000611723 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
CLTCL1-207ENST00000611723 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
CLTCL1-207ENST00000611723 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
CLTCL1-207ENST00000611723 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
CLTCL1-207ENST00000611723 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
CLTCL1-207ENST00000611723 MT4P47944 62 aa5.29□□□□□ -1.56
CLTCL1-207ENST00000611723 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
CLTCL1-207ENST00000611723 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
CLTCL1-207ENST00000611723 KRTAP5-10Q6L8G5 202 aa5.26□□□□□ -1.57
CLTCL1-207ENST00000611723 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
CLTCL1-207ENST00000611723 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
CLTCL1-207ENST00000611723 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CLTCL1-207ENST00000611723 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
CLTCL1-207ENST00000611723 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
CLTCL1-207ENST00000611723 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
CLTCL1-207ENST00000611723 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
CLTCL1-207ENST00000611723 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
CLTCL1-207ENST00000611723 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
CLTCL1-207ENST00000611723 MT1AP04731 61 aa4.87□□□□□ -1.63
CLTCL1-207ENST00000611723 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
CLTCL1-207ENST00000611723 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
CLTCL1-207ENST00000611723 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
CLTCL1-207ENST00000611723 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
CLTCL1-207ENST00000611723 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
CLTCL1-207ENST00000611723 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
CLTCL1-207ENST00000611723 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
CLTCL1-207ENST00000611723 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
CLTCL1-207ENST00000611723 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
CLTCL1-207ENST00000611723 MT3P25713 68 aa4.43□□□□□ -1.7
CLTCL1-207ENST00000611723 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
CLTCL1-207ENST00000611723 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
CLTCL1-207ENST00000611723 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
CLTCL1-207ENST00000611723 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
CLTCL1-207ENST00000611723 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.72
CLTCL1-207ENST00000611723 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
CLTCL1-207ENST00000611723 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CLTCL1-207ENST00000611723 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CLTCL1-207ENST00000611723 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
CLTCL1-207ENST00000611723 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
CLTCL1-207ENST00000611723 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CLTCL1-207ENST00000611723 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
CLTCL1-207ENST00000611723 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
CLTCL1-207ENST00000611723 INE1O15225 51 aa3.69□□□□□ -1.82
CLTCL1-207ENST00000611723 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
CLTCL1-207ENST00000611723 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
CLTCL1-207ENST00000611723 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
CLTCL1-207ENST00000611723 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
CLTCL1-207ENST00000611723 H3BS24 57 aa3.34□□□□□ -1.87
CLTCL1-207ENST00000611723 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
CLTCL1-207ENST00000611723 PRM1P04553 51 aa3.23□□□□□ -1.89
CLTCL1-207ENST00000611723 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
CLTCL1-207ENST00000611723 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CLTCL1-207ENST00000611723 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CLTCL1-207ENST00000611723 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CLTCL1-207ENST00000611723 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CLTCL1-207ENST00000611723 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
CLTCL1-207ENST00000611723 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms