RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
MUC1-224ENST00000611577 HMCN1Q96RW7 5635 aa6.52□□□□□ -1.37
MUC1-224ENST00000611577 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
MUC1-224ENST00000611577 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
MUC1-224ENST00000611577 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
MUC1-224ENST00000611577 MT1EP04732 61 aa6.49□□□□□ -1.37
MUC1-224ENST00000611577 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
MUC1-224ENST00000611577 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
MUC1-224ENST00000611577 AHNAK2Q8IVF2 5795 aa6.45□□□□□ -1.38
MUC1-224ENST00000611577 MT4P47944 62 aa6.39□□□□□ -1.39
MUC1-224ENST00000611577 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
MUC1-224ENST00000611577 ROMO1P60602 79 aa6.34□□□□□ -1.39
MUC1-224ENST00000611577 MT1GP13640 62 aa6.3□□□□□ -1.4
MUC1-224ENST00000611577 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
MUC1-224ENST00000611577 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
MUC1-224ENST00000611577 MT1LQ93083 61 aa6.26□□□□□ -1.41
MUC1-224ENST00000611577 KRTAP5-10Q6L8G5 202 aa6.24□□□□□ -1.41
MUC1-224ENST00000611577 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
MUC1-224ENST00000611577 MT1MQ8N339 61 aa6.21□□□□□ -1.42
MUC1-224ENST00000611577 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
MUC1-224ENST00000611577 KRTAP5-4Q6L8H1 288 aa6.15□□□□□ -1.42
MUC1-224ENST00000611577 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
MUC1-224ENST00000611577 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
MUC1-224ENST00000611577 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
MUC1-224ENST00000611577 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
MUC1-224ENST00000611577 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
MUC1-224ENST00000611577 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
MUC1-224ENST00000611577 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
MUC1-224ENST00000611577 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
MUC1-224ENST00000611577 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
MUC1-224ENST00000611577 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
MUC1-224ENST00000611577 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
MUC1-224ENST00000611577 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
MUC1-224ENST00000611577 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
MUC1-224ENST00000611577 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
MUC1-224ENST00000611577 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
MUC1-224ENST00000611577 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
MUC1-224ENST00000611577 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
MUC1-224ENST00000611577 AHNAKQ09666 5890 aaKnown RBP5.47□□□□□ -1.53
MUC1-224ENST00000611577 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
MUC1-224ENST00000611577 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
MUC1-224ENST00000611577 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
MUC1-224ENST00000611577 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
MUC1-224ENST00000611577 MT1AP04731 61 aa5.34□□□□□ -1.55
MUC1-224ENST00000611577 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
MUC1-224ENST00000611577 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
MUC1-224ENST00000611577 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
MUC1-224ENST00000611577 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
MUC1-224ENST00000611577 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
MUC1-224ENST00000611577 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
MUC1-224ENST00000611577 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
MUC1-224ENST00000611577 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
MUC1-224ENST00000611577 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
MUC1-224ENST00000611577 MT3P25713 68 aa4.9□□□□□ -1.63
MUC1-224ENST00000611577 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
MUC1-224ENST00000611577 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
MUC1-224ENST00000611577 H3BS24 57 aa4.6□□□□□ -1.67
MUC1-224ENST00000611577 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
MUC1-224ENST00000611577 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
MUC1-224ENST00000611577 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
MUC1-224ENST00000611577 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
MUC1-224ENST00000611577 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
MUC1-224ENST00000611577 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
MUC1-224ENST00000611577 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
MUC1-224ENST00000611577 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
MUC1-224ENST00000611577 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
MUC1-224ENST00000611577 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
MUC1-224ENST00000611577 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
MUC1-224ENST00000611577 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
MUC1-224ENST00000611577 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
MUC1-224ENST00000611577 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
MUC1-224ENST00000611577 INE1O15225 51 aa3.29□□□□□ -1.88
MUC1-224ENST00000611577 PRM1P04553 51 aa3.26□□□□□ -1.89
MUC1-224ENST00000611577 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
MUC1-224ENST00000611577 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.89
MUC1-224ENST00000611577 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
MUC1-224ENST00000611577 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 140.9 ms