RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
FDPS-220ENST00000611010 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
FDPS-220ENST00000611010 LINC01554Q52M75 96 aa5.03□□□□□ -1.6
FDPS-220ENST00000611010 ROMO1P60602 79 aa5.02□□□□□ -1.61
FDPS-220ENST00000611010 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
FDPS-220ENST00000611010 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
FDPS-220ENST00000611010 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
FDPS-220ENST00000611010 KRTAP12-2P59991 146 aa5□□□□□ -1.61
FDPS-220ENST00000611010 MT1XP80297 61 aa4.99□□□□□ -1.61
FDPS-220ENST00000611010 SPRR2DP22532 72 aa4.95□□□□□ -1.62
FDPS-220ENST00000611010 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
FDPS-220ENST00000611010 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
FDPS-220ENST00000611010 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
FDPS-220ENST00000611010 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
FDPS-220ENST00000611010 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
FDPS-220ENST00000611010 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
FDPS-220ENST00000611010 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
FDPS-220ENST00000611010 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
FDPS-220ENST00000611010 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
FDPS-220ENST00000611010 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
FDPS-220ENST00000611010 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
FDPS-220ENST00000611010 TNP1P09430 55 aa4.63□□□□□ -1.67
FDPS-220ENST00000611010 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
FDPS-220ENST00000611010 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
FDPS-220ENST00000611010 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
FDPS-220ENST00000611010 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
FDPS-220ENST00000611010 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
FDPS-220ENST00000611010 MT1EP04732 61 aa4.43□□□□□ -1.7
FDPS-220ENST00000611010 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
FDPS-220ENST00000611010 MT4P47944 62 aa4.38□□□□□ -1.71
FDPS-220ENST00000611010 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
FDPS-220ENST00000611010 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
FDPS-220ENST00000611010 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
FDPS-220ENST00000611010 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
FDPS-220ENST00000611010 MT1GP13640 62 aa4.25□□□□□ -1.73
FDPS-220ENST00000611010 MT1MQ8N339 61 aa4.24□□□□□ -1.73
FDPS-220ENST00000611010 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
FDPS-220ENST00000611010 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
FDPS-220ENST00000611010 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
FDPS-220ENST00000611010 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
FDPS-220ENST00000611010 MT1LQ93083 61 aa4.17□□□□□ -1.74
FDPS-220ENST00000611010 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
FDPS-220ENST00000611010 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
FDPS-220ENST00000611010 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
FDPS-220ENST00000611010 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
FDPS-220ENST00000611010 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
FDPS-220ENST00000611010 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
FDPS-220ENST00000611010 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
FDPS-220ENST00000611010 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
FDPS-220ENST00000611010 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
FDPS-220ENST00000611010 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
FDPS-220ENST00000611010 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
FDPS-220ENST00000611010 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
FDPS-220ENST00000611010 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
FDPS-220ENST00000611010 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
FDPS-220ENST00000611010 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
FDPS-220ENST00000611010 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
FDPS-220ENST00000611010 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
FDPS-220ENST00000611010 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
FDPS-220ENST00000611010 MT1AP04731 61 aa3.53□□□□□ -1.84
FDPS-220ENST00000611010 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
FDPS-220ENST00000611010 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
FDPS-220ENST00000611010 INE1O15225 51 aa3.44□□□□□ -1.86
FDPS-220ENST00000611010 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
FDPS-220ENST00000611010 MT3P25713 68 aa3.18□□□□□ -1.9
FDPS-220ENST00000611010 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
FDPS-220ENST00000611010 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
FDPS-220ENST00000611010 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
FDPS-220ENST00000611010 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
FDPS-220ENST00000611010 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
FDPS-220ENST00000611010 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
FDPS-220ENST00000611010 PRM1P04553 51 aa2.61□□□□□ -1.99
FDPS-220ENST00000611010 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
FDPS-220ENST00000611010 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
FDPS-220ENST00000611010 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
FDPS-220ENST00000611010 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
FDPS-220ENST00000611010 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms