RNA–Protein interactions for RNA: ENST00000609262.5

HNF4A-207, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-207ENST00000609262 MT1MQ8N339 61 aa6.28□□□□□ -1.4
HNF4A-207ENST00000609262 MT1LQ93083 61 aa6.27□□□□□ -1.41
HNF4A-207ENST00000609262 A8MU10 97 aa6.25□□□□□ -1.41
HNF4A-207ENST00000609262 UQCR11O14957 56 aa6.25□□□□□ -1.41
HNF4A-207ENST00000609262 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
HNF4A-207ENST00000609262 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
HNF4A-207ENST00000609262 CDC42SE1Q9NRR8 79 aa6.22□□□□□ -1.41
HNF4A-207ENST00000609262 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
HNF4A-207ENST00000609262 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
HNF4A-207ENST00000609262 TNP1P09430 55 aa6.2□□□□□ -1.42
HNF4A-207ENST00000609262 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
HNF4A-207ENST00000609262 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
HNF4A-207ENST00000609262 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
HNF4A-207ENST00000609262 MT4P47944 62 aa6.15□□□□□ -1.42
HNF4A-207ENST00000609262 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
HNF4A-207ENST00000609262 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
HNF4A-207ENST00000609262 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
HNF4A-207ENST00000609262 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
HNF4A-207ENST00000609262 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
HNF4A-207ENST00000609262 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
HNF4A-207ENST00000609262 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
HNF4A-207ENST00000609262 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
HNF4A-207ENST00000609262 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
HNF4A-207ENST00000609262 K7ERS5 55 aa5.86□□□□□ -1.47
HNF4A-207ENST00000609262 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
HNF4A-207ENST00000609262 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
HNF4A-207ENST00000609262 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
HNF4A-207ENST00000609262 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
HNF4A-207ENST00000609262 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
HNF4A-207ENST00000609262 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
HNF4A-207ENST00000609262 ROMO1P60602 79 aa5.67□□□□□ -1.5
HNF4A-207ENST00000609262 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
HNF4A-207ENST00000609262 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
HNF4A-207ENST00000609262 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
HNF4A-207ENST00000609262 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
HNF4A-207ENST00000609262 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
HNF4A-207ENST00000609262 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
HNF4A-207ENST00000609262 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
HNF4A-207ENST00000609262 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
HNF4A-207ENST00000609262 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
HNF4A-207ENST00000609262 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
HNF4A-207ENST00000609262 MT1AP04731 61 aa5.34□□□□□ -1.55
HNF4A-207ENST00000609262 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
HNF4A-207ENST00000609262 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
HNF4A-207ENST00000609262 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
HNF4A-207ENST00000609262 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
HNF4A-207ENST00000609262 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
HNF4A-207ENST00000609262 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
HNF4A-207ENST00000609262 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
HNF4A-207ENST00000609262 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
HNF4A-207ENST00000609262 MUC5ACP98088 5654 aa4.96□□□□□ -1.62
HNF4A-207ENST00000609262 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
HNF4A-207ENST00000609262 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
HNF4A-207ENST00000609262 MT3P25713 68 aa4.89□□□□□ -1.63
HNF4A-207ENST00000609262 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
HNF4A-207ENST00000609262 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
HNF4A-207ENST00000609262 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
HNF4A-207ENST00000609262 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
HNF4A-207ENST00000609262 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
HNF4A-207ENST00000609262 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
HNF4A-207ENST00000609262 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
HNF4A-207ENST00000609262 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
HNF4A-207ENST00000609262 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
HNF4A-207ENST00000609262 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
HNF4A-207ENST00000609262 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
HNF4A-207ENST00000609262 H3BS24 57 aa3.83□□□□□ -1.8
HNF4A-207ENST00000609262 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
HNF4A-207ENST00000609262 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
HNF4A-207ENST00000609262 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
HNF4A-207ENST00000609262 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
HNF4A-207ENST00000609262 INE1O15225 51 aa3.64□□□□□ -1.83
HNF4A-207ENST00000609262 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
HNF4A-207ENST00000609262 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
HNF4A-207ENST00000609262 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
HNF4A-207ENST00000609262 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
HNF4A-207ENST00000609262 PRM1P04553 51 aa2.95□□□□□ -1.94
HNF4A-207ENST00000609262 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
HNF4A-207ENST00000609262 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms