RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 SMIM2Q9BVW6 85 aa-1.82□□□□□ -2.7
SNORA28-201ENST00000606769 NRXN3Q9Y4C0 1643 aa-1.83□□□□□ -2.7
SNORA28-201ENST00000606769 CEP250Q9BV73 2442 aa-1.83□□□□□ -2.7
SNORA28-201ENST00000606769 CEP350Q5VT06 3117 aa-1.84□□□□□ -2.7
SNORA28-201ENST00000606769 DDX60Q8IY21 1712 aaKnown RBP-1.85□□□□□ -2.71
SNORA28-201ENST00000606769 DMDP11532 3685 aa-1.86□□□□□ -2.71
SNORA28-201ENST00000606769 TRPM2O94759 1503 aa-1.86□□□□□ -2.71
SNORA28-201ENST00000606769 WDFY4Q6ZS81 3184 aa-1.87□□□□□ -2.71
SNORA28-201ENST00000606769 CLTCL1P53675 1640 aa-1.88□□□□□ -2.71
SNORA28-201ENST00000606769 SMIM5Q71RC9 77 aa-1.88□□□□□ -2.71
SNORA28-201ENST00000606769 ADCY10Q96PN6 1610 aa-1.89□□□□□ -2.71
SNORA28-201ENST00000606769 ABCC8Q09428 1581 aa-1.9□□□□□ -2.71
SNORA28-201ENST00000606769 FANCD2Q9BXW9 1451 aa-1.91□□□□□ -2.72
SNORA28-201ENST00000606769 KRTAP19-6Q3LI70 58 aa-1.93□□□□□ -2.72
SNORA28-201ENST00000606769 NDUFA1O15239 70 aa-1.95□□□□□ -2.72
SNORA28-201ENST00000606769 CMC2Q9NRP2 79 aa-1.95□□□□□ -2.72
SNORA28-201ENST00000606769 EP400Q96L91 3159 aa-1.95□□□□□ -2.72
SNORA28-201ENST00000606769 MUC3AQ02505 3323 aa-1.99□□□□□ -2.73
SNORA28-201ENST00000606769 DCHS1Q96JQ0 3298 aa-2.03□□□□□ -2.73
SNORA28-201ENST00000606769 DNAH12Q6ZR08 3092 aa-2.05□□□□□ -2.74
SNORA28-201ENST00000606769 SMIM31A0A1B0GVY4 71 aa-2.05□□□□□ -2.74
SNORA28-201ENST00000606769 CENPEQ02224 2701 aa-2.05□□□□□ -2.74
SNORA28-201ENST00000606769 TOMM7Q9P0U1 55 aa-2.06□□□□□ -2.74
SNORA28-201ENST00000606769 MKI67P46013 3256 aaKnown RBP-2.06□□□□□ -2.74
SNORA28-201ENST00000606769 XIRP2A4UGR9 3374 aa-2.09□□□□□ -2.74
SNORA28-201ENST00000606769 LINC01590Q5TEZ4 76 aa-2.1□□□□□ -2.75
SNORA28-201ENST00000606769 TTTY10Q9BZA0 68 aa-2.12□□□□□ -2.75
SNORA28-201ENST00000606769 RHPN1-AS1Q9BWJ2 59 aa-2.13□□□□□ -2.75
SNORA28-201ENST00000606769 USP34Q70CQ2 3546 aa-2.13□□□□□ -2.75
SNORA28-201ENST00000606769 DUOX1Q9NRD9 1551 aa-2.14□□□□□ -2.75
SNORA28-201ENST00000606769 DNAH14Q0VDD8 3507 aa-2.14□□□□□ -2.75
SNORA28-201ENST00000606769 DEFB133Q30KQ1 61 aa-2.15□□□□□ -2.75
SNORA28-201ENST00000606769 LOC400499M0QZD8 3231 aa-2.15□□□□□ -2.75
SNORA28-201ENST00000606769 CFAP47Q6ZTR5 3102 aa-2.16□□□□□ -2.76
SNORA28-201ENST00000606769 A0A096LNI7 61 aa-2.17□□□□□ -2.76
SNORA28-201ENST00000606769 KRTAP19-2Q3LHN2 52 aa-2.17□□□□□ -2.76
SNORA28-201ENST00000606769 ERICH3Q5RHP9 1530 aa-2.17□□□□□ -2.76
SNORA28-201ENST00000606769 SAMD9LQ8IVG5 1584 aa-2.18□□□□□ -2.76
SNORA28-201ENST00000606769 RPL39P62891 51 aaKnown RBP-2.18□□□□□ -2.76
SNORA28-201ENST00000606769 UNC80Q8N2C7 3258 aa-2.19□□□□□ -2.76
SNORA28-201ENST00000606769 HTN1P15515 57 aa-2.22□□□□□ -2.76
SNORA28-201ENST00000606769 SNRPGP15A8MWD9 76 aa-2.23□□□□□ -2.77
SNORA28-201ENST00000606769 ASPMQ8IZT6 3477 aa-2.26□□□□□ -2.77
SNORA28-201ENST00000606769 TOP2AP11388 1531 aaKnown RBP-2.27□□□□□ -2.77
SNORA28-201ENST00000606769 DEFB124Q8NES8 71 aa-2.28□□□□□ -2.77
SNORA28-201ENST00000606769 RPL39LQ96EH5 51 aaKnown RBP-2.28□□□□□ -2.77
SNORA28-201ENST00000606769 CD52P31358 61 aa-2.31□□□□□ -2.78
SNORA28-201ENST00000606769 BRCA2P51587 3418 aa-2.31□□□□□ -2.78
SNORA28-201ENST00000606769 IQGAP2Q13576 1575 aa-2.32□□□□□ -2.78
SNORA28-201ENST00000606769 ATP7AQ04656 1500 aa-2.32□□□□□ -2.78
SNORA28-201ENST00000606769 DEFB104AQ8WTQ1 72 aa-2.35□□□□□ -2.79
SNORA28-201ENST00000606769 MROH2BQ7Z745 1585 aa-2.36□□□□□ -2.79
SNORA28-201ENST00000606769 VCANP13611 3396 aa-2.38□□□□□ -2.79
SNORA28-201ENST00000606769 TOMM5Q8N4H5 51 aa-2.42□□□□□ -2.8
SNORA28-201ENST00000606769 CENPFP49454 3210 aa-2.43□□□□□ -2.8
SNORA28-201ENST00000606769 CDH23Q9H251 3354 aa-2.46□□□□□ -2.8
SNORA28-201ENST00000606769 LINC01556Q5JQF7 62 aa-2.52□□□□□ -2.81
SNORA28-201ENST00000606769 VPS13AQ96RL7 3174 aa-2.53□□□□□ -2.81
SNORA28-201ENST00000606769 H3BUX3 64 aa-2.54□□□□□ -2.82
SNORA28-201ENST00000606769 K7EIM0 57 aa-2.62□□□□□ -2.83
SNORA28-201ENST00000606769 ARHGAP5-AS1Q96IT6 56 aa-2.73□□□□□ -2.85
SNORA28-201ENST00000606769 A0A096LPF7 62 aa-2.76□□□□□ -2.85
SNORA28-201ENST00000606769 APELAP0DMC3 54 aa-2.76□□□□□ -2.85
SNORA28-201ENST00000606769 UTRNP46939 3433 aa-2.77□□□□□ -2.85
SNORA28-201ENST00000606769 PRCDQ00LT1 54 aa-2.78□□□□□ -2.85
SNORA28-201ENST00000606769 GCC2Q8IWJ2 1684 aa-2.8□□□□□ -2.86
SNORA28-201ENST00000606769 SNRPGP62308 76 aaKnown RBP-2.84□□□□□ -2.86
SNORA28-201ENST00000606769 TMEM167AQ8TBQ9 72 aa-2.87□□□□□ -2.87
SNORA28-201ENST00000606769 HTN3P15516 51 aa-2.98□□□□□ -2.89
SNORA28-201ENST00000606769 RPL39P5Q59GN2 51 aa-2.99□□□□□ -2.89
SNORA28-201ENST00000606769 H3BSH0 61 aa-3.04□□□□□ -2.9
SNORA28-201ENST00000606769 DEFB108AA8MXU0 73 aa-3.06□□□□□ -2.9
SNORA28-201ENST00000606769 GOLGB1Q14789 3259 aaKnown RBP-3.09□□□□□ -2.9
SNORA28-201ENST00000606769 Q9Y3F1 56 aa-3.17□□□□□ -2.92
SNORA28-201ENST00000606769 COX14Q96I36 57 aa-3.37□□□□□ -2.95
SNORA28-201ENST00000606769 DEFB108BQ8NET1 73 aa-3.41□□□□□ -2.96
SNORA28-201ENST00000606769 STATHP02808 62 aa-3.81□□□□□ -3.02
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms