RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	C20orf197	Q8N268	126 aa		1.14	□□□□□ -2.23
LAMA4-222	ENST00000604740	MUC12	Q9UKN1	5478 aa		1.14	□□□□□ -2.23
LAMA4-222	ENST00000604740	TRAV7	A0A075B6U4	112 aa		1.13	□□□□□ -2.23
LAMA4-222	ENST00000604740		H3BPC8	53 aa		1.13	□□□□□ -2.23
LAMA4-222	ENST00000604740		K7EP34	96 aa		1.13	□□□□□ -2.23
LAMA4-222	ENST00000604740	ATP5EP2	Q5VTU8	51 aa		1.13	□□□□□ -2.23
LAMA4-222	ENST00000604740	GTF2H5	Q6ZYL4	71 aa		1.13	□□□□□ -2.23
LAMA4-222	ENST00000604740	PLAC4	Q8WY50	150 aa		1.13	□□□□□ -2.23
LAMA4-222	ENST00000604740		A0A1B0GU33	70 aa		1.12	□□□□□ -2.23
LAMA4-222	ENST00000604740	CCDC179	H3BU77	68 aa		1.12	□□□□□ -2.23
LAMA4-222	ENST00000604740	TMEM258	P61165	79 aa		1.12	□□□□□ -2.23
LAMA4-222	ENST00000604740	SPRR2F	Q96RM1	72 aa		1.12	□□□□□ -2.23
LAMA4-222	ENST00000604740		A0A087WVE0	104 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740		H0Y9P7	68 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	SPRR2E	P22531	72 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	SPRR2B	P35325	72 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	SPRR2A	P35326	72 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	KRTAP25-1	Q3LHN0	102 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	ETDB	Q3ZM63	59 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	KRTAP8-1	Q8IUC2	63 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	KRTAP2-1	Q9BYU5	128 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740		R4GN34	69 aa		1.11	□□□□□ -2.23
LAMA4-222	ENST00000604740	MT1X	P80297	61 aa		1.1	□□□□□ -2.23
LAMA4-222	ENST00000604740	LINC00643	Q86TS7	51 aa		1.09	□□□□□ -2.23
LAMA4-222	ENST00000604740	LINC00208	Q96KT6	92 aa		1.09	□□□□□ -2.23
LAMA4-222	ENST00000604740		M0QZ58	72 aa		1.08	□□□□□ -2.24
LAMA4-222	ENST00000604740	SPRR2D	P22532	72 aa		1.08	□□□□□ -2.24
LAMA4-222	ENST00000604740	ROMO1	P60602	79 aa		1.08	□□□□□ -2.24
LAMA4-222	ENST00000604740	SPTSSB	Q8NFR3	76 aa		1.08	□□□□□ -2.24
LAMA4-222	ENST00000604740	DMAC1	Q96GE9	116 aa		1.07	□□□□□ -2.24
LAMA4-222	ENST00000604740	SERP1	Q9Y6X1	66 aa		1.07	□□□□□ -2.24
LAMA4-222	ENST00000604740	ACYP2	P14621	99 aa		1.06	□□□□□ -2.24
LAMA4-222	ENST00000604740	KRTAP12-1	P59990	96 aa		1.06	□□□□□ -2.24
LAMA4-222	ENST00000604740	MT-ATP8	P03928	68 aa		1.05	□□□□□ -2.24
LAMA4-222	ENST00000604740	ATP5E	P56381	51 aa	Predicted RBP	1.03	□□□□□ -2.24
LAMA4-222	ENST00000604740	CHKB-CPT1B	H3BT56	60 aa		1.02	□□□□□ -2.25
LAMA4-222	ENST00000604740	MIR22HG	Q0VDD5	57 aa		1.02	□□□□□ -2.25
LAMA4-222	ENST00000604740	COX7C	P15954	63 aa		1.01	□□□□□ -2.25
LAMA4-222	ENST00000604740	KRTAP5-10	Q6L8G5	202 aa		1.01	□□□□□ -2.25
LAMA4-222	ENST00000604740	KRTAP19-3	Q7Z4W3	81 aa		1	□□□□□ -2.25
LAMA4-222	ENST00000604740	MUC16	Q8WXI7	14507 aa		1	□□□□□ -2.25
LAMA4-222	ENST00000604740	MT1G	P13640	62 aa		0.99	□□□□□ -2.25
LAMA4-222	ENST00000604740	KRTAP19-7	Q3SYF9	63 aa		0.99	□□□□□ -2.25
LAMA4-222	ENST00000604740	MT1E	P04732	61 aa		0.98	□□□□□ -2.25
LAMA4-222	ENST00000604740		Q1T7F1	81 aa		0.98	□□□□□ -2.25
LAMA4-222	ENST00000604740	CDC42SE1	Q9NRR8	79 aa		0.98	□□□□□ -2.25
LAMA4-222	ENST00000604740	CYSTM1	Q9H1C7	97 aa		0.97	□□□□□ -2.25
LAMA4-222	ENST00000604740	GPR98	Q8WXG9	6306 aa		0.97	□□□□□ -2.25
LAMA4-222	ENST00000604740		A0A0D9SG42	100 aa		0.96	□□□□□ -2.26
LAMA4-222	ENST00000604740	SERP2	Q8N6R1	65 aa		0.96	□□□□□ -2.26
LAMA4-222	ENST00000604740	DST	Q03001	7570 aa	Known RBP	0.96	□□□□□ -2.26
LAMA4-222	ENST00000604740	KRTAP19-5	Q3LI72	72 aa		0.95	□□□□□ -2.26
LAMA4-222	ENST00000604740	COA5	Q86WW8	74 aa		0.95	□□□□□ -2.26
LAMA4-222	ENST00000604740	SNURF	Q9Y675	71 aa		0.95	□□□□□ -2.26
LAMA4-222	ENST00000604740	MT1M	Q8N339	61 aa		0.94	□□□□□ -2.26
LAMA4-222	ENST00000604740	MT1L	Q93083	61 aa		0.94	□□□□□ -2.26
LAMA4-222	ENST00000604740	C10orf95	Q9H7T3	257 aa		0.94	□□□□□ -2.26
LAMA4-222	ENST00000604740	TNP1	P09430	55 aa		0.93	□□□□□ -2.26
LAMA4-222	ENST00000604740	SPATA8	Q6RVD6	105 aa		0.93	□□□□□ -2.26
LAMA4-222	ENST00000604740	AHNAK2	Q8IVF2	5795 aa		0.92	□□□□□ -2.26
LAMA4-222	ENST00000604740	MT4	P47944	62 aa		0.92	□□□□□ -2.26
LAMA4-222	ENST00000604740		A0A1B0GU69	56 aa		0.91	□□□□□ -2.26
LAMA4-222	ENST00000604740		H7BZZ5	65 aa		0.9	□□□□□ -2.27
LAMA4-222	ENST00000604740	INE1	O15225	51 aa		0.9	□□□□□ -2.27
LAMA4-222	ENST00000604740	PRR15L	Q9BU68	103 aa		0.9	□□□□□ -2.27
LAMA4-222	ENST00000604740	KRTAP20-2	Q3LI61	65 aa		0.88	□□□□□ -2.27
LAMA4-222	ENST00000604740	UQCR11	O14957	56 aa		0.86	□□□□□ -2.27
LAMA4-222	ENST00000604740	LINC01558	Q9Y6Z2	57 aa		0.86	□□□□□ -2.27
LAMA4-222	ENST00000604740	MT1A	P04731	61 aa		0.81	□□□□□ -2.28
LAMA4-222	ENST00000604740	AHNAK	Q09666	5890 aa	Known RBP	0.8	□□□□□ -2.28
LAMA4-222	ENST00000604740	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.79	□□□□□ -2.28
LAMA4-222	ENST00000604740	MUC5AC	P98088	5654 aa		0.78	□□□□□ -2.28
LAMA4-222	ENST00000604740	KRTAP6-1	Q3LI64	71 aa		0.78	□□□□□ -2.28
LAMA4-222	ENST00000604740	SYNE1	Q8NF91	8797 aa	Known RBP	0.77	□□□□□ -2.29
LAMA4-222	ENST00000604740	KRTAP6-2	Q3LI66	62 aa		0.76	□□□□□ -2.29
LAMA4-222	ENST00000604740	PHGR1	C9JFL3	82 aa		0.53	□□□□□ -2.32
LAMA4-222	ENST00000604740	KRTAP21-1	Q3LI58	79 aa		0.43	□□□□□ -2.34
LAMA4-222	ENST00000604740	PRM1	P04553	51 aa		0.37	□□□□□ -2.35

Retrieved 78 of 20,778 RNA–protein pairs in 35.3 ms