RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 SPRR2AP35326 72 aa4.94□□□□□ -1.62
HERPUD2-207ENST00000603731 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
HERPUD2-207ENST00000603731 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
HERPUD2-207ENST00000603731 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
HERPUD2-207ENST00000603731 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
HERPUD2-207ENST00000603731 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
HERPUD2-207ENST00000603731 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
HERPUD2-207ENST00000603731 SPRR2DP22532 72 aa4.78□□□□□ -1.64
HERPUD2-207ENST00000603731 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
HERPUD2-207ENST00000603731 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
HERPUD2-207ENST00000603731 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
HERPUD2-207ENST00000603731 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
HERPUD2-207ENST00000603731 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
HERPUD2-207ENST00000603731 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
HERPUD2-207ENST00000603731 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
HERPUD2-207ENST00000603731 MT1EP04732 61 aa4.6□□□□□ -1.67
HERPUD2-207ENST00000603731 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
HERPUD2-207ENST00000603731 MT1LQ93083 61 aa4.51□□□□□ -1.69
HERPUD2-207ENST00000603731 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
HERPUD2-207ENST00000603731 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
HERPUD2-207ENST00000603731 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
HERPUD2-207ENST00000603731 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
HERPUD2-207ENST00000603731 MT1GP13640 62 aa4.42□□□□□ -1.7
HERPUD2-207ENST00000603731 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
HERPUD2-207ENST00000603731 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
HERPUD2-207ENST00000603731 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
HERPUD2-207ENST00000603731 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
HERPUD2-207ENST00000603731 MT1MQ8N339 61 aa4.35□□□□□ -1.71
HERPUD2-207ENST00000603731 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
HERPUD2-207ENST00000603731 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
HERPUD2-207ENST00000603731 MT4P47944 62 aa4.26□□□□□ -1.73
HERPUD2-207ENST00000603731 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
HERPUD2-207ENST00000603731 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
HERPUD2-207ENST00000603731 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
HERPUD2-207ENST00000603731 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
HERPUD2-207ENST00000603731 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
HERPUD2-207ENST00000603731 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
HERPUD2-207ENST00000603731 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
HERPUD2-207ENST00000603731 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
HERPUD2-207ENST00000603731 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
HERPUD2-207ENST00000603731 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
HERPUD2-207ENST00000603731 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
HERPUD2-207ENST00000603731 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
HERPUD2-207ENST00000603731 MT1AP04731 61 aa3.85□□□□□ -1.79
HERPUD2-207ENST00000603731 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
HERPUD2-207ENST00000603731 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
HERPUD2-207ENST00000603731 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
HERPUD2-207ENST00000603731 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
HERPUD2-207ENST00000603731 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
HERPUD2-207ENST00000603731 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
HERPUD2-207ENST00000603731 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
HERPUD2-207ENST00000603731 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
HERPUD2-207ENST00000603731 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
HERPUD2-207ENST00000603731 H3BS24 57 aa3.51□□□□□ -1.85
HERPUD2-207ENST00000603731 MT3P25713 68 aa3.51□□□□□ -1.85
HERPUD2-207ENST00000603731 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
HERPUD2-207ENST00000603731 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
HERPUD2-207ENST00000603731 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
HERPUD2-207ENST00000603731 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
HERPUD2-207ENST00000603731 INE1O15225 51 aa3.34□□□□□ -1.87
HERPUD2-207ENST00000603731 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
HERPUD2-207ENST00000603731 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
HERPUD2-207ENST00000603731 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
HERPUD2-207ENST00000603731 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
HERPUD2-207ENST00000603731 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
HERPUD2-207ENST00000603731 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
HERPUD2-207ENST00000603731 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
HERPUD2-207ENST00000603731 PRM1P04553 51 aa2.77□□□□□ -1.97
HERPUD2-207ENST00000603731 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
HERPUD2-207ENST00000603731 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
HERPUD2-207ENST00000603731 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
HERPUD2-207ENST00000603731 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
HERPUD2-207ENST00000603731 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
HERPUD2-207ENST00000603731 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
HERPUD2-207ENST00000603731 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
HERPUD2-207ENST00000603731 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
HERPUD2-207ENST00000603731 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
HERPUD2-207ENST00000603731 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 37.1 ms