RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 MT1EP04732 61 aa5□□□□□ -1.61
SUPT5H-220ENST00000601978 K7ERS5 55 aa4.95□□□□□ -1.62
SUPT5H-220ENST00000601978 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
SUPT5H-220ENST00000601978 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SUPT5H-220ENST00000601978 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
SUPT5H-220ENST00000601978 MT4P47944 62 aa4.9□□□□□ -1.63
SUPT5H-220ENST00000601978 MT1GP13640 62 aa4.89□□□□□ -1.63
SUPT5H-220ENST00000601978 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
SUPT5H-220ENST00000601978 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
SUPT5H-220ENST00000601978 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
SUPT5H-220ENST00000601978 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
SUPT5H-220ENST00000601978 TNP1P09430 55 aa4.82□□□□□ -1.64
SUPT5H-220ENST00000601978 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
SUPT5H-220ENST00000601978 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
SUPT5H-220ENST00000601978 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
SUPT5H-220ENST00000601978 MT1MQ8N339 61 aa4.78□□□□□ -1.64
SUPT5H-220ENST00000601978 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
SUPT5H-220ENST00000601978 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
SUPT5H-220ENST00000601978 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
SUPT5H-220ENST00000601978 MT1LQ93083 61 aa4.72□□□□□ -1.65
SUPT5H-220ENST00000601978 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
SUPT5H-220ENST00000601978 ROMO1P60602 79 aa4.7□□□□□ -1.66
SUPT5H-220ENST00000601978 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
SUPT5H-220ENST00000601978 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
SUPT5H-220ENST00000601978 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
SUPT5H-220ENST00000601978 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
SUPT5H-220ENST00000601978 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
SUPT5H-220ENST00000601978 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SUPT5H-220ENST00000601978 PMAIP1Q13794 54 aa4.48□□□□□ -1.69
SUPT5H-220ENST00000601978 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
SUPT5H-220ENST00000601978 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SUPT5H-220ENST00000601978 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
SUPT5H-220ENST00000601978 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
SUPT5H-220ENST00000601978 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SUPT5H-220ENST00000601978 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
SUPT5H-220ENST00000601978 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
SUPT5H-220ENST00000601978 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SUPT5H-220ENST00000601978 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
SUPT5H-220ENST00000601978 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
SUPT5H-220ENST00000601978 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
SUPT5H-220ENST00000601978 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
SUPT5H-220ENST00000601978 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SUPT5H-220ENST00000601978 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
SUPT5H-220ENST00000601978 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
SUPT5H-220ENST00000601978 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.76
SUPT5H-220ENST00000601978 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
SUPT5H-220ENST00000601978 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
SUPT5H-220ENST00000601978 MT1AP04731 61 aa4.01□□□□□ -1.77
SUPT5H-220ENST00000601978 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
SUPT5H-220ENST00000601978 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
SUPT5H-220ENST00000601978 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SUPT5H-220ENST00000601978 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
SUPT5H-220ENST00000601978 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
SUPT5H-220ENST00000601978 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SUPT5H-220ENST00000601978 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
SUPT5H-220ENST00000601978 MT3P25713 68 aa3.7□□□□□ -1.82
SUPT5H-220ENST00000601978 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
SUPT5H-220ENST00000601978 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
SUPT5H-220ENST00000601978 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
SUPT5H-220ENST00000601978 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SUPT5H-220ENST00000601978 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SUPT5H-220ENST00000601978 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
SUPT5H-220ENST00000601978 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
SUPT5H-220ENST00000601978 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
SUPT5H-220ENST00000601978 H3BS24 57 aa3.03□□□□□ -1.92
SUPT5H-220ENST00000601978 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
SUPT5H-220ENST00000601978 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SUPT5H-220ENST00000601978 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
SUPT5H-220ENST00000601978 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SUPT5H-220ENST00000601978 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
SUPT5H-220ENST00000601978 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
SUPT5H-220ENST00000601978 INE1O15225 51 aa2.71□□□□□ -1.98
SUPT5H-220ENST00000601978 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
SUPT5H-220ENST00000601978 PRM1P04553 51 aa2.45□□□□□ -2.02
SUPT5H-220ENST00000601978 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
SUPT5H-220ENST00000601978 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SUPT5H-220ENST00000601978 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SUPT5H-220ENST00000601978 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 86.8 ms