RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 TNP1P09430 55 aa5.64□□□□□ -1.51
IRF3-229ENST00000601373 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
IRF3-229ENST00000601373 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
IRF3-229ENST00000601373 KRTAP20-1Q3LI63 56 aa5.61□□□□□ -1.51
IRF3-229ENST00000601373 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
IRF3-229ENST00000601373 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
IRF3-229ENST00000601373 MDN1Q9NU22 5596 aa5.46□□□□□ -1.53
IRF3-229ENST00000601373 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
IRF3-229ENST00000601373 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
IRF3-229ENST00000601373 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
IRF3-229ENST00000601373 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
IRF3-229ENST00000601373 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
IRF3-229ENST00000601373 KMT2DO14686 5537 aa5.37□□□□□ -1.55
IRF3-229ENST00000601373 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
IRF3-229ENST00000601373 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
IRF3-229ENST00000601373 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
IRF3-229ENST00000601373 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
IRF3-229ENST00000601373 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
IRF3-229ENST00000601373 SPRR2EP22531 72 aa5.16□□□□□ -1.58
IRF3-229ENST00000601373 SPRR2BP35325 72 aa5.16□□□□□ -1.58
IRF3-229ENST00000601373 SPRR2AP35326 72 aa5.16□□□□□ -1.58
IRF3-229ENST00000601373 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
IRF3-229ENST00000601373 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
IRF3-229ENST00000601373 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
IRF3-229ENST00000601373 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
IRF3-229ENST00000601373 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
IRF3-229ENST00000601373 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
IRF3-229ENST00000601373 SPRR2DP22532 72 aa5□□□□□ -1.61
IRF3-229ENST00000601373 MT1EP04732 61 aa4.98□□□□□ -1.61
IRF3-229ENST00000601373 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
IRF3-229ENST00000601373 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
IRF3-229ENST00000601373 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
IRF3-229ENST00000601373 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
IRF3-229ENST00000601373 MT1LQ93083 61 aa4.87□□□□□ -1.63
IRF3-229ENST00000601373 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
IRF3-229ENST00000601373 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
IRF3-229ENST00000601373 MT1GP13640 62 aa4.79□□□□□ -1.64
IRF3-229ENST00000601373 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
IRF3-229ENST00000601373 MT1MQ8N339 61 aa4.69□□□□□ -1.66
IRF3-229ENST00000601373 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
IRF3-229ENST00000601373 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
IRF3-229ENST00000601373 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
IRF3-229ENST00000601373 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
IRF3-229ENST00000601373 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
IRF3-229ENST00000601373 MT4P47944 62 aa4.37□□□□□ -1.71
IRF3-229ENST00000601373 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
IRF3-229ENST00000601373 INE1O15225 51 aa4.29□□□□□ -1.72
IRF3-229ENST00000601373 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
IRF3-229ENST00000601373 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
IRF3-229ENST00000601373 MT1AP04731 61 aa4.17□□□□□ -1.74
IRF3-229ENST00000601373 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
IRF3-229ENST00000601373 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
IRF3-229ENST00000601373 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
IRF3-229ENST00000601373 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
IRF3-229ENST00000601373 MT3P25713 68 aa3.97□□□□□ -1.77
IRF3-229ENST00000601373 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
IRF3-229ENST00000601373 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
IRF3-229ENST00000601373 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
IRF3-229ENST00000601373 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
IRF3-229ENST00000601373 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
IRF3-229ENST00000601373 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
IRF3-229ENST00000601373 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
IRF3-229ENST00000601373 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.81
IRF3-229ENST00000601373 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
IRF3-229ENST00000601373 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
IRF3-229ENST00000601373 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
IRF3-229ENST00000601373 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
IRF3-229ENST00000601373 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
IRF3-229ENST00000601373 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
IRF3-229ENST00000601373 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
IRF3-229ENST00000601373 PRM1P04553 51 aa3.11□□□□□ -1.91
IRF3-229ENST00000601373 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
IRF3-229ENST00000601373 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
IRF3-229ENST00000601373 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
IRF3-229ENST00000601373 PHGR1C9JFL3 82 aa2.58□□□□□ -2
IRF3-229ENST00000601373 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
IRF3-229ENST00000601373 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
IRF3-229ENST00000601373 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 72.2 ms