RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 HIST1H2BKO60814 126 aa1.61□□□□□ -2.15
LINC00343-208ENST00000599264 HIST1H2BJP06899 126 aa1.61□□□□□ -2.15
LINC00343-208ENST00000599264 LOC110117498A0A087WWA1 95 aa1.6□□□□□ -2.15
LINC00343-208ENST00000599264 A0A1W2PPM0 123 aa1.59□□□□□ -2.15
LINC00343-208ENST00000599264 K7EP34 96 aa1.59□□□□□ -2.15
LINC00343-208ENST00000599264 A0A0D9SG42 100 aa1.58□□□□□ -2.16
LINC00343-208ENST00000599264 CYP4F30PQ9H0H9 118 aa1.58□□□□□ -2.16
LINC00343-208ENST00000599264 MT-ATP8P03928 68 aa1.57□□□□□ -2.16
LINC00343-208ENST00000599264 JMJD7-PLA2G4BH0Y9G9 81 aa1.56□□□□□ -2.16
LINC00343-208ENST00000599264 COX6CP09669 75 aa1.56□□□□□ -2.16
LINC00343-208ENST00000599264 COX8AP10176 69 aa1.56□□□□□ -2.16
LINC00343-208ENST00000599264 C14orf132Q9NPU4 83 aa1.56□□□□□ -2.16
LINC00343-208ENST00000599264 DLEU1O43261 78 aa1.55□□□□□ -2.16
LINC00343-208ENST00000599264 HIGD1BQ9P298 99 aa1.54□□□□□ -2.16
LINC00343-208ENST00000599264 ACYP1P07311 99 aa1.53□□□□□ -2.16
LINC00343-208ENST00000599264 K7ERJ3 54 aa1.52□□□□□ -2.17
LINC00343-208ENST00000599264 TP53AIP1Q9HCN2 124 aa1.52□□□□□ -2.17
LINC00343-208ENST00000599264 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
LINC00343-208ENST00000599264 LOC101927531A0A1B0GV80 90 aa1.5□□□□□ -2.17
LINC00343-208ENST00000599264 C14orf144Q96I85 54 aa1.5□□□□□ -2.17
LINC00343-208ENST00000599264 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
LINC00343-208ENST00000599264 TSTD3H0UI37 97 aa1.49□□□□□ -2.17
LINC00343-208ENST00000599264 SNURFQ9Y675 71 aa1.49□□□□□ -2.17
LINC00343-208ENST00000599264 ROMO1P60602 79 aa1.48□□□□□ -2.17
LINC00343-208ENST00000599264 ATXN8Q156A1 80 aa1.46□□□□□ -2.18
LINC00343-208ENST00000599264 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
LINC00343-208ENST00000599264 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
LINC00343-208ENST00000599264 RPS28P62857 69 aaKnown RBP1.45□□□□□ -2.18
LINC00343-208ENST00000599264 VAMP8Q9BV40 100 aa1.44□□□□□ -2.18
LINC00343-208ENST00000599264 MT1AP04731 61 aa1.43□□□□□ -2.18
LINC00343-208ENST00000599264 HSD52Q0P140 79 aa1.42□□□□□ -2.18
LINC00343-208ENST00000599264 SPATA45Q537H7 98 aa1.42□□□□□ -2.18
LINC00343-208ENST00000599264 INE1O15225 51 aa1.4□□□□□ -2.19
LINC00343-208ENST00000599264 SCGB1A1P11684 91 aa1.39□□□□□ -2.19
LINC00343-208ENST00000599264 SPCS1Q9Y6A9 102 aa1.39□□□□□ -2.19
LINC00343-208ENST00000599264 H0Y9P7 68 aa1.37□□□□□ -2.19
LINC00343-208ENST00000599264 ATOX1O00244 68 aa1.37□□□□□ -2.19
LINC00343-208ENST00000599264 CDC42SE1Q9NRR8 79 aa1.37□□□□□ -2.19
LINC00343-208ENST00000599264 F8W1H4 67 aa1.36□□□□□ -2.19
LINC00343-208ENST00000599264 COX7CP15954 63 aa1.36□□□□□ -2.19
LINC00343-208ENST00000599264 UBL5Q9BZL1 73 aa1.35□□□□□ -2.19
LINC00343-208ENST00000599264 DMAC1Q96GE9 116 aa1.34□□□□□ -2.19
LINC00343-208ENST00000599264 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
LINC00343-208ENST00000599264 UQCRQO14949 82 aa1.33□□□□□ -2.2
LINC00343-208ENST00000599264 LOC105371267A0A1B0GV96 52 aa1.32□□□□□ -2.2
LINC00343-208ENST00000599264 MIR22HGQ0VDD5 57 aa1.31□□□□□ -2.2
LINC00343-208ENST00000599264 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
LINC00343-208ENST00000599264 TNP1P09430 55 aa1.3□□□□□ -2.2
LINC00343-208ENST00000599264 BRK1Q8WUW1 75 aa1.3□□□□□ -2.2
LINC00343-208ENST00000599264 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
LINC00343-208ENST00000599264 S100A1P23297 94 aa1.28□□□□□ -2.2
LINC00343-208ENST00000599264 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
LINC00343-208ENST00000599264 UQCR10Q9UDW1 63 aa1.26□□□□□ -2.21
LINC00343-208ENST00000599264 SPATA8Q6RVD6 105 aa1.22□□□□□ -2.21
LINC00343-208ENST00000599264 ACYP2P14621 99 aa1.21□□□□□ -2.22
LINC00343-208ENST00000599264 J3QR89 54 aa1.19□□□□□ -2.22
LINC00343-208ENST00000599264 M0R143 59 aa1.19□□□□□ -2.22
LINC00343-208ENST00000599264 PYY3Q5JQD4 70 aa1.19□□□□□ -2.22
LINC00343-208ENST00000599264 CHKB-CPT1BH3BT56 60 aa1.18□□□□□ -2.22
LINC00343-208ENST00000599264 ATP5EP2Q5VTU8 51 aa1.11□□□□□ -2.23
LINC00343-208ENST00000599264 K7ERU9 68 aa1.1□□□□□ -2.23
LINC00343-208ENST00000599264 SERP1Q9Y6X1 66 aa1.09□□□□□ -2.23
LINC00343-208ENST00000599264 CCDC179H3BU77 68 aa1.07□□□□□ -2.24
LINC00343-208ENST00000599264 ETDBQ3ZM63 59 aa1.03□□□□□ -2.24
LINC00343-208ENST00000599264 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
LINC00343-208ENST00000599264 LINC00643Q86TS7 51 aa0.98□□□□□ -2.25
LINC00343-208ENST00000599264 SERP2Q8N6R1 65 aa0.96□□□□□ -2.26
LINC00343-208ENST00000599264 H7BZZ5 65 aa0.95□□□□□ -2.26
LINC00343-208ENST00000599264 A0A1B0GU69 56 aa0.91□□□□□ -2.26
LINC00343-208ENST00000599264 SMIM6P0DI80 62 aa0.91□□□□□ -2.26
LINC00343-208ENST00000599264 GTF2H5Q6ZYL4 71 aa0.91□□□□□ -2.26
LINC00343-208ENST00000599264 PRR15LQ9BU68 103 aa0.88□□□□□ -2.27
LINC00343-208ENST00000599264 COL5A1-AS1Q5SY13 56 aa0.87□□□□□ -2.27
LINC00343-208ENST00000599264 A0A1B0GV90 55 aa0.83□□□□□ -2.28
LINC00343-208ENST00000599264 ATP5EP56381 51 aaPredicted RBP0.77□□□□□ -2.29
LINC00343-208ENST00000599264 UQCR11O14957 56 aa0.72□□□□□ -2.29
LINC00343-208ENST00000599264 LINC01558Q9Y6Z2 57 aa0.67□□□□□ -2.3
LINC00343-208ENST00000599264 PRM1P04553 51 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 58.8 ms