RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
SHKBP1-218ENST00000598907 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
SHKBP1-218ENST00000598907 K7ERS5 55 aa5.48□□□□□ -1.53
SHKBP1-218ENST00000598907 MT4P47944 62 aa5.47□□□□□ -1.53
SHKBP1-218ENST00000598907 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
SHKBP1-218ENST00000598907 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
SHKBP1-218ENST00000598907 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
SHKBP1-218ENST00000598907 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
SHKBP1-218ENST00000598907 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
SHKBP1-218ENST00000598907 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
SHKBP1-218ENST00000598907 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
SHKBP1-218ENST00000598907 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
SHKBP1-218ENST00000598907 TNP1P09430 55 aa5.29□□□□□ -1.56
SHKBP1-218ENST00000598907 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
SHKBP1-218ENST00000598907 ROMO1P60602 79 aa5.24□□□□□ -1.57
SHKBP1-218ENST00000598907 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
SHKBP1-218ENST00000598907 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
SHKBP1-218ENST00000598907 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
SHKBP1-218ENST00000598907 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SHKBP1-218ENST00000598907 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
SHKBP1-218ENST00000598907 MT1EP04732 61 aa5.12□□□□□ -1.59
SHKBP1-218ENST00000598907 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SHKBP1-218ENST00000598907 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SHKBP1-218ENST00000598907 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
SHKBP1-218ENST00000598907 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
SHKBP1-218ENST00000598907 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
SHKBP1-218ENST00000598907 MT1GP13640 62 aa4.97□□□□□ -1.61
SHKBP1-218ENST00000598907 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
SHKBP1-218ENST00000598907 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
SHKBP1-218ENST00000598907 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SHKBP1-218ENST00000598907 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
SHKBP1-218ENST00000598907 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SHKBP1-218ENST00000598907 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
SHKBP1-218ENST00000598907 MT1LQ93083 61 aa4.84□□□□□ -1.63
SHKBP1-218ENST00000598907 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
SHKBP1-218ENST00000598907 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
SHKBP1-218ENST00000598907 H3BS24 57 aa4.78□□□□□ -1.64
SHKBP1-218ENST00000598907 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
SHKBP1-218ENST00000598907 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
SHKBP1-218ENST00000598907 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
SHKBP1-218ENST00000598907 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
SHKBP1-218ENST00000598907 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SHKBP1-218ENST00000598907 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
SHKBP1-218ENST00000598907 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
SHKBP1-218ENST00000598907 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
SHKBP1-218ENST00000598907 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
SHKBP1-218ENST00000598907 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
SHKBP1-218ENST00000598907 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
SHKBP1-218ENST00000598907 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
SHKBP1-218ENST00000598907 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
SHKBP1-218ENST00000598907 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
SHKBP1-218ENST00000598907 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
SHKBP1-218ENST00000598907 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SHKBP1-218ENST00000598907 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
SHKBP1-218ENST00000598907 MT1AP04731 61 aa4.12□□□□□ -1.75
SHKBP1-218ENST00000598907 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
SHKBP1-218ENST00000598907 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
SHKBP1-218ENST00000598907 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
SHKBP1-218ENST00000598907 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
SHKBP1-218ENST00000598907 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
SHKBP1-218ENST00000598907 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
SHKBP1-218ENST00000598907 MT3P25713 68 aa3.74□□□□□ -1.81
SHKBP1-218ENST00000598907 INE1O15225 51 aa3.62□□□□□ -1.83
SHKBP1-218ENST00000598907 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
SHKBP1-218ENST00000598907 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
SHKBP1-218ENST00000598907 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
SHKBP1-218ENST00000598907 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
SHKBP1-218ENST00000598907 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
SHKBP1-218ENST00000598907 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
SHKBP1-218ENST00000598907 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
SHKBP1-218ENST00000598907 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SHKBP1-218ENST00000598907 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
SHKBP1-218ENST00000598907 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SHKBP1-218ENST00000598907 PRM1P04553 51 aa2.7□□□□□ -1.98
SHKBP1-218ENST00000598907 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SHKBP1-218ENST00000598907 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SHKBP1-218ENST00000598907 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SHKBP1-218ENST00000598907 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 102.8 ms