RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
SIN3B-208ENST00000596638 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
SIN3B-208ENST00000596638 NEBP20929 6669 aa3.64□□□□□ -1.83
SIN3B-208ENST00000596638 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
SIN3B-208ENST00000596638 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.83
SIN3B-208ENST00000596638 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
SIN3B-208ENST00000596638 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
SIN3B-208ENST00000596638 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
SIN3B-208ENST00000596638 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
SIN3B-208ENST00000596638 MT1BP07438 61 aa3.42□□□□□ -1.86
SIN3B-208ENST00000596638 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
SIN3B-208ENST00000596638 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
SIN3B-208ENST00000596638 INE1O15225 51 aa3.39□□□□□ -1.87
SIN3B-208ENST00000596638 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
SIN3B-208ENST00000596638 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
SIN3B-208ENST00000596638 MT1XP80297 61 aa3.36□□□□□ -1.87
SIN3B-208ENST00000596638 KMT2DO14686 5537 aa3.36□□□□□ -1.87
SIN3B-208ENST00000596638 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SIN3B-208ENST00000596638 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
SIN3B-208ENST00000596638 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
SIN3B-208ENST00000596638 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
SIN3B-208ENST00000596638 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
SIN3B-208ENST00000596638 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
SIN3B-208ENST00000596638 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
SIN3B-208ENST00000596638 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
SIN3B-208ENST00000596638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
SIN3B-208ENST00000596638 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
SIN3B-208ENST00000596638 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
SIN3B-208ENST00000596638 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
SIN3B-208ENST00000596638 SPRR2EP22531 72 aa3.1□□□□□ -1.91
SIN3B-208ENST00000596638 SPRR2BP35325 72 aa3.1□□□□□ -1.91
SIN3B-208ENST00000596638 SPRR2AP35326 72 aa3.1□□□□□ -1.91
SIN3B-208ENST00000596638 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
SIN3B-208ENST00000596638 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
SIN3B-208ENST00000596638 SPRR2DP22532 72 aa3□□□□□ -1.93
SIN3B-208ENST00000596638 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
SIN3B-208ENST00000596638 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
SIN3B-208ENST00000596638 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
SIN3B-208ENST00000596638 MT1LQ93083 61 aa2.93□□□□□ -1.94
SIN3B-208ENST00000596638 MT1EP04732 61 aa2.92□□□□□ -1.94
SIN3B-208ENST00000596638 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
SIN3B-208ENST00000596638 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
SIN3B-208ENST00000596638 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
SIN3B-208ENST00000596638 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
SIN3B-208ENST00000596638 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SIN3B-208ENST00000596638 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
SIN3B-208ENST00000596638 MT1GP13640 62 aa2.75□□□□□ -1.97
SIN3B-208ENST00000596638 MT3P25713 68 aa2.74□□□□□ -1.97
SIN3B-208ENST00000596638 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SIN3B-208ENST00000596638 MT1MQ8N339 61 aa2.73□□□□□ -1.97
SIN3B-208ENST00000596638 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
SIN3B-208ENST00000596638 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
SIN3B-208ENST00000596638 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
SIN3B-208ENST00000596638 MT4P47944 62 aa2.66□□□□□ -1.98
SIN3B-208ENST00000596638 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
SIN3B-208ENST00000596638 MT1AP04731 61 aa2.6□□□□□ -1.99
SIN3B-208ENST00000596638 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
SIN3B-208ENST00000596638 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
SIN3B-208ENST00000596638 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
SIN3B-208ENST00000596638 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
SIN3B-208ENST00000596638 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
SIN3B-208ENST00000596638 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SIN3B-208ENST00000596638 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SIN3B-208ENST00000596638 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
SIN3B-208ENST00000596638 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
SIN3B-208ENST00000596638 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
SIN3B-208ENST00000596638 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
SIN3B-208ENST00000596638 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
SIN3B-208ENST00000596638 PRM1P04553 51 aa2.32□□□□□ -2.04
SIN3B-208ENST00000596638 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
SIN3B-208ENST00000596638 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
SIN3B-208ENST00000596638 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SIN3B-208ENST00000596638 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SIN3B-208ENST00000596638 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SIN3B-208ENST00000596638 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
SIN3B-208ENST00000596638 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SIN3B-208ENST00000596638 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
SIN3B-208ENST00000596638 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 569.2 ms