RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
PDE4C-208ENST00000595343 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
PDE4C-208ENST00000595343 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
PDE4C-208ENST00000595343 KRTAP19-7Q3SYF9 63 aa7□□□□□ -1.29
PDE4C-208ENST00000595343 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
PDE4C-208ENST00000595343 MT1EP04732 61 aa6.97□□□□□ -1.29
PDE4C-208ENST00000595343 ROMO1P60602 79 aa6.95□□□□□ -1.3
PDE4C-208ENST00000595343 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
PDE4C-208ENST00000595343 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
PDE4C-208ENST00000595343 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
PDE4C-208ENST00000595343 MT4P47944 62 aa6.8□□□□□ -1.32
PDE4C-208ENST00000595343 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
PDE4C-208ENST00000595343 MT1GP13640 62 aa6.78□□□□□ -1.32
PDE4C-208ENST00000595343 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
PDE4C-208ENST00000595343 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
PDE4C-208ENST00000595343 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
PDE4C-208ENST00000595343 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
PDE4C-208ENST00000595343 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
PDE4C-208ENST00000595343 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
PDE4C-208ENST00000595343 MT1MQ8N339 61 aa6.66□□□□□ -1.34
PDE4C-208ENST00000595343 KRTAP5-10Q6L8G5 202 aa6.65□□□□□ -1.34
PDE4C-208ENST00000595343 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
PDE4C-208ENST00000595343 MT1LQ93083 61 aa6.59□□□□□ -1.35
PDE4C-208ENST00000595343 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
PDE4C-208ENST00000595343 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
PDE4C-208ENST00000595343 TNP1P09430 55 aa6.53□□□□□ -1.36
PDE4C-208ENST00000595343 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
PDE4C-208ENST00000595343 KRTAP5-7Q6L8G8 165 aa6.45□□□□□ -1.38
PDE4C-208ENST00000595343 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
PDE4C-208ENST00000595343 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
PDE4C-208ENST00000595343 KRTAP20-2Q3LI61 65 aa6.26□□□□□ -1.41
PDE4C-208ENST00000595343 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
PDE4C-208ENST00000595343 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
PDE4C-208ENST00000595343 KRTAP5-5Q701N2 237 aaPredicted RBP6.15□□□□□ -1.42
PDE4C-208ENST00000595343 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
PDE4C-208ENST00000595343 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
PDE4C-208ENST00000595343 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
PDE4C-208ENST00000595343 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
PDE4C-208ENST00000595343 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
PDE4C-208ENST00000595343 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
PDE4C-208ENST00000595343 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
PDE4C-208ENST00000595343 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
PDE4C-208ENST00000595343 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
PDE4C-208ENST00000595343 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
PDE4C-208ENST00000595343 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
PDE4C-208ENST00000595343 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
PDE4C-208ENST00000595343 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
PDE4C-208ENST00000595343 MT1AP04731 61 aa5.59□□□□□ -1.51
PDE4C-208ENST00000595343 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
PDE4C-208ENST00000595343 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
PDE4C-208ENST00000595343 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
PDE4C-208ENST00000595343 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
PDE4C-208ENST00000595343 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
PDE4C-208ENST00000595343 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
PDE4C-208ENST00000595343 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
PDE4C-208ENST00000595343 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
PDE4C-208ENST00000595343 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
PDE4C-208ENST00000595343 MT3P25713 68 aa5.13□□□□□ -1.59
PDE4C-208ENST00000595343 H3BS24 57 aa4.98□□□□□ -1.61
PDE4C-208ENST00000595343 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
PDE4C-208ENST00000595343 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
PDE4C-208ENST00000595343 INE1O15225 51 aa4.65□□□□□ -1.67
PDE4C-208ENST00000595343 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
PDE4C-208ENST00000595343 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
PDE4C-208ENST00000595343 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
PDE4C-208ENST00000595343 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
PDE4C-208ENST00000595343 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
PDE4C-208ENST00000595343 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
PDE4C-208ENST00000595343 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
PDE4C-208ENST00000595343 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
PDE4C-208ENST00000595343 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
PDE4C-208ENST00000595343 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
PDE4C-208ENST00000595343 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
PDE4C-208ENST00000595343 PRM1P04553 51 aa3.59□□□□□ -1.83
PDE4C-208ENST00000595343 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
PDE4C-208ENST00000595343 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
PDE4C-208ENST00000595343 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
PDE4C-208ENST00000595343 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 96 ms