RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 H3BS24 57 aa5.03□□□□□ -1.6
LDLRAD4-219ENST00000593236 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
LDLRAD4-219ENST00000593236 SPRR2DP22532 72 aa5.02□□□□□ -1.61
LDLRAD4-219ENST00000593236 PRAC1Q96KF2 57 aa5□□□□□ -1.61
LDLRAD4-219ENST00000593236 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
LDLRAD4-219ENST00000593236 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
LDLRAD4-219ENST00000593236 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
LDLRAD4-219ENST00000593236 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
LDLRAD4-219ENST00000593236 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
LDLRAD4-219ENST00000593236 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
LDLRAD4-219ENST00000593236 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
LDLRAD4-219ENST00000593236 MT1EP04732 61 aa4.73□□□□□ -1.65
LDLRAD4-219ENST00000593236 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
LDLRAD4-219ENST00000593236 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
LDLRAD4-219ENST00000593236 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
LDLRAD4-219ENST00000593236 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
LDLRAD4-219ENST00000593236 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
LDLRAD4-219ENST00000593236 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
LDLRAD4-219ENST00000593236 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
LDLRAD4-219ENST00000593236 MT1LQ93083 61 aa4.58□□□□□ -1.68
LDLRAD4-219ENST00000593236 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
LDLRAD4-219ENST00000593236 MT1GP13640 62 aa4.51□□□□□ -1.69
LDLRAD4-219ENST00000593236 MT1MQ8N339 61 aa4.48□□□□□ -1.69
LDLRAD4-219ENST00000593236 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
LDLRAD4-219ENST00000593236 MT4P47944 62 aa4.43□□□□□ -1.7
LDLRAD4-219ENST00000593236 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
LDLRAD4-219ENST00000593236 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
LDLRAD4-219ENST00000593236 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
LDLRAD4-219ENST00000593236 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
LDLRAD4-219ENST00000593236 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
LDLRAD4-219ENST00000593236 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
LDLRAD4-219ENST00000593236 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
LDLRAD4-219ENST00000593236 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
LDLRAD4-219ENST00000593236 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
LDLRAD4-219ENST00000593236 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
LDLRAD4-219ENST00000593236 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
LDLRAD4-219ENST00000593236 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
LDLRAD4-219ENST00000593236 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
LDLRAD4-219ENST00000593236 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
LDLRAD4-219ENST00000593236 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
LDLRAD4-219ENST00000593236 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
LDLRAD4-219ENST00000593236 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
LDLRAD4-219ENST00000593236 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
LDLRAD4-219ENST00000593236 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
LDLRAD4-219ENST00000593236 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
LDLRAD4-219ENST00000593236 MT1AP04731 61 aa3.89□□□□□ -1.79
LDLRAD4-219ENST00000593236 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
LDLRAD4-219ENST00000593236 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
LDLRAD4-219ENST00000593236 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
LDLRAD4-219ENST00000593236 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
LDLRAD4-219ENST00000593236 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
LDLRAD4-219ENST00000593236 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
LDLRAD4-219ENST00000593236 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
LDLRAD4-219ENST00000593236 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
LDLRAD4-219ENST00000593236 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
LDLRAD4-219ENST00000593236 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
LDLRAD4-219ENST00000593236 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
LDLRAD4-219ENST00000593236 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
LDLRAD4-219ENST00000593236 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
LDLRAD4-219ENST00000593236 MT3P25713 68 aa3.53□□□□□ -1.84
LDLRAD4-219ENST00000593236 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
LDLRAD4-219ENST00000593236 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
LDLRAD4-219ENST00000593236 INE1O15225 51 aa3.27□□□□□ -1.89
LDLRAD4-219ENST00000593236 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
LDLRAD4-219ENST00000593236 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
LDLRAD4-219ENST00000593236 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
LDLRAD4-219ENST00000593236 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
LDLRAD4-219ENST00000593236 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
LDLRAD4-219ENST00000593236 PRM1P04553 51 aa2.72□□□□□ -1.97
LDLRAD4-219ENST00000593236 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
LDLRAD4-219ENST00000593236 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
LDLRAD4-219ENST00000593236 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
LDLRAD4-219ENST00000593236 PHGR1C9JFL3 82 aa2.53□□□□□ -2
LDLRAD4-219ENST00000593236 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
LDLRAD4-219ENST00000593236 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
LDLRAD4-219ENST00000593236 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
LDLRAD4-219ENST00000593236 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
LDLRAD4-219ENST00000593236 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 38.2 ms