RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
VMP1-217ENST00000593168 TNP1P09430 55 aa5.45□□□□□ -1.54
VMP1-217ENST00000593168 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
VMP1-217ENST00000593168 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
VMP1-217ENST00000593168 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
VMP1-217ENST00000593168 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
VMP1-217ENST00000593168 SPRR2EP22531 72 aa5.35□□□□□ -1.55
VMP1-217ENST00000593168 SPRR2BP35325 72 aa5.35□□□□□ -1.55
VMP1-217ENST00000593168 SPRR2AP35326 72 aa5.35□□□□□ -1.55
VMP1-217ENST00000593168 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
VMP1-217ENST00000593168 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
VMP1-217ENST00000593168 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
VMP1-217ENST00000593168 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
VMP1-217ENST00000593168 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
VMP1-217ENST00000593168 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
VMP1-217ENST00000593168 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
VMP1-217ENST00000593168 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
VMP1-217ENST00000593168 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
VMP1-217ENST00000593168 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
VMP1-217ENST00000593168 SPRR2DP22532 72 aa5.18□□□□□ -1.58
VMP1-217ENST00000593168 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
VMP1-217ENST00000593168 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
VMP1-217ENST00000593168 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
VMP1-217ENST00000593168 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
VMP1-217ENST00000593168 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
VMP1-217ENST00000593168 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
VMP1-217ENST00000593168 MT1EP04732 61 aa4.9□□□□□ -1.63
VMP1-217ENST00000593168 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
VMP1-217ENST00000593168 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
VMP1-217ENST00000593168 MT1LQ93083 61 aa4.79□□□□□ -1.64
VMP1-217ENST00000593168 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
VMP1-217ENST00000593168 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
VMP1-217ENST00000593168 MT1GP13640 62 aa4.72□□□□□ -1.65
VMP1-217ENST00000593168 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
VMP1-217ENST00000593168 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
VMP1-217ENST00000593168 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
VMP1-217ENST00000593168 MT1MQ8N339 61 aa4.62□□□□□ -1.67
VMP1-217ENST00000593168 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
VMP1-217ENST00000593168 MT4P47944 62 aa4.57□□□□□ -1.68
VMP1-217ENST00000593168 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
VMP1-217ENST00000593168 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
VMP1-217ENST00000593168 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
VMP1-217ENST00000593168 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
VMP1-217ENST00000593168 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
VMP1-217ENST00000593168 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
VMP1-217ENST00000593168 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
VMP1-217ENST00000593168 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
VMP1-217ENST00000593168 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
VMP1-217ENST00000593168 MT1AP04731 61 aa4.09□□□□□ -1.75
VMP1-217ENST00000593168 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
VMP1-217ENST00000593168 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
VMP1-217ENST00000593168 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
VMP1-217ENST00000593168 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
VMP1-217ENST00000593168 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
VMP1-217ENST00000593168 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
VMP1-217ENST00000593168 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
VMP1-217ENST00000593168 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
VMP1-217ENST00000593168 MT3P25713 68 aa3.73□□□□□ -1.81
VMP1-217ENST00000593168 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
VMP1-217ENST00000593168 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
VMP1-217ENST00000593168 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
VMP1-217ENST00000593168 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
VMP1-217ENST00000593168 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
VMP1-217ENST00000593168 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
VMP1-217ENST00000593168 INE1O15225 51 aa3.5□□□□□ -1.85
VMP1-217ENST00000593168 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
VMP1-217ENST00000593168 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
VMP1-217ENST00000593168 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
VMP1-217ENST00000593168 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
VMP1-217ENST00000593168 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
VMP1-217ENST00000593168 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
VMP1-217ENST00000593168 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
VMP1-217ENST00000593168 PRM1P04553 51 aa2.9□□□□□ -1.95
VMP1-217ENST00000593168 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
VMP1-217ENST00000593168 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
VMP1-217ENST00000593168 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
VMP1-217ENST00000593168 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
VMP1-217ENST00000593168 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 159.4 ms