RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
TPM4-215ENST00000592138 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
TPM4-215ENST00000592138 A0A0D9SG42 100 aa3.96□□□□□ -1.78
TPM4-215ENST00000592138 ROMO1P60602 79 aa3.95□□□□□ -1.78
TPM4-215ENST00000592138 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
TPM4-215ENST00000592138 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
TPM4-215ENST00000592138 K7ERS5 55 aa3.91□□□□□ -1.78
TPM4-215ENST00000592138 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
TPM4-215ENST00000592138 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
TPM4-215ENST00000592138 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
TPM4-215ENST00000592138 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
TPM4-215ENST00000592138 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
TPM4-215ENST00000592138 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
TPM4-215ENST00000592138 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
TPM4-215ENST00000592138 SPRR2EP22531 72 aa3.78□□□□□ -1.8
TPM4-215ENST00000592138 SPRR2BP35325 72 aa3.78□□□□□ -1.8
TPM4-215ENST00000592138 SPRR2AP35326 72 aa3.78□□□□□ -1.8
TPM4-215ENST00000592138 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
TPM4-215ENST00000592138 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
TPM4-215ENST00000592138 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
TPM4-215ENST00000592138 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
TPM4-215ENST00000592138 TNP1P09430 55 aa3.71□□□□□ -1.82
TPM4-215ENST00000592138 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
TPM4-215ENST00000592138 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
TPM4-215ENST00000592138 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
TPM4-215ENST00000592138 SPRR2DP22532 72 aa3.66□□□□□ -1.82
TPM4-215ENST00000592138 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
TPM4-215ENST00000592138 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
TPM4-215ENST00000592138 MT1EP04732 61 aa3.61□□□□□ -1.83
TPM4-215ENST00000592138 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
TPM4-215ENST00000592138 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
TPM4-215ENST00000592138 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
TPM4-215ENST00000592138 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
TPM4-215ENST00000592138 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
TPM4-215ENST00000592138 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
TPM4-215ENST00000592138 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
TPM4-215ENST00000592138 MT1GP13640 62 aa3.49□□□□□ -1.85
TPM4-215ENST00000592138 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
TPM4-215ENST00000592138 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
TPM4-215ENST00000592138 MT1LQ93083 61 aa3.48□□□□□ -1.85
TPM4-215ENST00000592138 MT1MQ8N339 61 aa3.42□□□□□ -1.86
TPM4-215ENST00000592138 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
TPM4-215ENST00000592138 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
TPM4-215ENST00000592138 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
TPM4-215ENST00000592138 MT4P47944 62 aa3.24□□□□□ -1.89
TPM4-215ENST00000592138 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
TPM4-215ENST00000592138 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
TPM4-215ENST00000592138 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
TPM4-215ENST00000592138 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
TPM4-215ENST00000592138 INE1O15225 51 aa3.16□□□□□ -1.9
TPM4-215ENST00000592138 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
TPM4-215ENST00000592138 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
TPM4-215ENST00000592138 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
TPM4-215ENST00000592138 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
TPM4-215ENST00000592138 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
TPM4-215ENST00000592138 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
TPM4-215ENST00000592138 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
TPM4-215ENST00000592138 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
TPM4-215ENST00000592138 MT1AP04731 61 aa2.97□□□□□ -1.93
TPM4-215ENST00000592138 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
TPM4-215ENST00000592138 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
TPM4-215ENST00000592138 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
TPM4-215ENST00000592138 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TPM4-215ENST00000592138 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
TPM4-215ENST00000592138 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
TPM4-215ENST00000592138 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
TPM4-215ENST00000592138 MT3P25713 68 aa2.71□□□□□ -1.98
TPM4-215ENST00000592138 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
TPM4-215ENST00000592138 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
TPM4-215ENST00000592138 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
TPM4-215ENST00000592138 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
TPM4-215ENST00000592138 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
TPM4-215ENST00000592138 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
TPM4-215ENST00000592138 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
TPM4-215ENST00000592138 PRM1P04553 51 aa1.9□□□□□ -2.11
TPM4-215ENST00000592138 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
TPM4-215ENST00000592138 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TPM4-215ENST00000592138 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 461.2 ms