RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	SPRR2A	P35326	72 aa		4.18	□□□□□ -1.74
CIRBP-236	ENST00000592051	KRTAP23-1	A1A580	65 aa		4.09	□□□□□ -1.75
CIRBP-236	ENST00000592051	KRTAP12-3	P60328	96 aa		4.08	□□□□□ -1.76
CIRBP-236	ENST00000592051	KRTAP19-3	Q7Z4W3	81 aa		4.08	□□□□□ -1.76
CIRBP-236	ENST00000592051	MT1L	Q93083	61 aa		4.07	□□□□□ -1.76
CIRBP-236	ENST00000592051	LCE5A	Q5TCM9	118 aa		4.06	□□□□□ -1.76
CIRBP-236	ENST00000592051	SPRR2D	P22532	72 aa		4.03	□□□□□ -1.76
CIRBP-236	ENST00000592051	KRTAP2-2	Q9BYT5	123 aa		4.02	□□□□□ -1.77
CIRBP-236	ENST00000592051	KRTAP2-1	Q9BYU5	128 aa		4.02	□□□□□ -1.77
CIRBP-236	ENST00000592051	GPR98	Q8WXG9	6306 aa		4.01	□□□□□ -1.77
CIRBP-236	ENST00000592051	MT1G	P13640	62 aa		4	□□□□□ -1.77
CIRBP-236	ENST00000592051	PP632	Q6XCG6	107 aa		3.97	□□□□□ -1.77
CIRBP-236	ENST00000592051	MT1M	Q8N339	61 aa		3.97	□□□□□ -1.77
CIRBP-236	ENST00000592051	PMAIP1	Q13794	54 aa		3.96	□□□□□ -1.78
CIRBP-236	ENST00000592051	PRO0628	Q9UI54	55 aa		3.95	□□□□□ -1.78
CIRBP-236	ENST00000592051	KRTAP15-1	Q3LI76	137 aa		3.92	□□□□□ -1.78
CIRBP-236	ENST00000592051	KRTAP4-7	Q9BYR0	210 aa		3.92	□□□□□ -1.78
CIRBP-236	ENST00000592051	KRTAP4-3	Q9BYR4	195 aa		3.92	□□□□□ -1.78
CIRBP-236	ENST00000592051	LCE3B	Q5TA77	95 aa		3.9	□□□□□ -1.79
CIRBP-236	ENST00000592051	DST	Q03001	7570 aa	Known RBP	3.83	□□□□□ -1.8
CIRBP-236	ENST00000592051	PRAC1	Q96KF2	57 aa		3.82	□□□□□ -1.8
CIRBP-236	ENST00000592051	KRTAP19-4	Q3LI73	84 aa		3.81	□□□□□ -1.8
CIRBP-236	ENST00000592051	LCE3C	Q5T5A8	94 aa		3.8	□□□□□ -1.8
CIRBP-236	ENST00000592051	LOC100996750	A0A140TA64	210 aa		3.69	□□□□□ -1.82
CIRBP-236	ENST00000592051	KTN1-AS1	Q86SY8	53 aa		3.69	□□□□□ -1.82
CIRBP-236	ENST00000592051	KRTAP9-6	A8MVA2	160 aa		3.65	□□□□□ -1.83
CIRBP-236	ENST00000592051	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.64	□□□□□ -1.83
CIRBP-236	ENST00000592051	KRTAP5-4	Q6L8H1	288 aa		3.63	□□□□□ -1.83
CIRBP-236	ENST00000592051	KRTAP4-9	Q9BYQ8	210 aa		3.59	□□□□□ -1.83
CIRBP-236	ENST00000592051	LCE4A	Q5TA78	99 aa		3.58	□□□□□ -1.84
CIRBP-236	ENST00000592051	LCE1D	Q5T752	114 aa		3.54	□□□□□ -1.84
CIRBP-236	ENST00000592051	HMCN1	Q96RW7	5635 aa		3.52	□□□□□ -1.85
CIRBP-236	ENST00000592051	MT4	P47944	62 aa		3.52	□□□□□ -1.85
CIRBP-236	ENST00000592051	KRTAP4-6	Q9BYQ5	205 aa		3.49	□□□□□ -1.85
CIRBP-236	ENST00000592051	SPRR5	A0A1B0GTR4	108 aa		3.47	□□□□□ -1.85
CIRBP-236	ENST00000592051	KRTAP5-10	Q6L8G5	202 aa		3.47	□□□□□ -1.85
CIRBP-236	ENST00000592051	MT1A	P04731	61 aa		3.45	□□□□□ -1.86
CIRBP-236	ENST00000592051	KRTAP6-1	Q3LI64	71 aa		3.44	□□□□□ -1.86
CIRBP-236	ENST00000592051	KRTAP5-7	Q6L8G8	165 aa		3.43	□□□□□ -1.86
CIRBP-236	ENST00000592051	SYNE1	Q8NF91	8797 aa	Known RBP	3.41	□□□□□ -1.86
CIRBP-236	ENST00000592051	AHNAK2	Q8IVF2	5795 aa		3.4	□□□□□ -1.87
CIRBP-236	ENST00000592051	KRTAP20-2	Q3LI61	65 aa		3.39	□□□□□ -1.87
CIRBP-236	ENST00000592051	KRTAP12-4	P60329	112 aa		3.38	□□□□□ -1.87
CIRBP-236	ENST00000592051	KRTAP5-3	Q6L8H2	238 aa		3.3	□□□□□ -1.88
CIRBP-236	ENST00000592051	KRTAP9-4	Q9BYQ2	154 aa		3.3	□□□□□ -1.88
CIRBP-236	ENST00000592051	KRTAP5-2	Q701N4	177 aa		3.23	□□□□□ -1.89
CIRBP-236	ENST00000592051	KRTAP6-2	Q3LI66	62 aa		3.21	□□□□□ -1.9
CIRBP-236	ENST00000592051	MT3	P25713	68 aa		3.11	□□□□□ -1.91
CIRBP-236	ENST00000592051		A0A0A0MQY5	61 aa		3.09	□□□□□ -1.91
CIRBP-236	ENST00000592051	LUZP6	Q538Z0	58 aa		3.04	□□□□□ -1.92
CIRBP-236	ENST00000592051		H3BS24	57 aa		3.02	□□□□□ -1.93
CIRBP-236	ENST00000592051	AHNAK	Q09666	5890 aa	Known RBP	3.01	□□□□□ -1.93
CIRBP-236	ENST00000592051	KRTAP4-11	Q9BYQ6	195 aa		3.01	□□□□□ -1.93
CIRBP-236	ENST00000592051	MUC5AC	P98088	5654 aa		2.96	□□□□□ -1.94
CIRBP-236	ENST00000592051	OBSCN	Q5VST9	7968 aa		2.92	□□□□□ -1.94
CIRBP-236	ENST00000592051	KRTAP5-8	O75690	187 aa		2.92	□□□□□ -1.94
CIRBP-236	ENST00000592051	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.88	□□□□□ -1.95
CIRBP-236	ENST00000592051	KRTAP5-1	Q6L8H4	278 aa		2.85	□□□□□ -1.95
CIRBP-236	ENST00000592051	NDUFAF8	A1L188	74 aa		2.81	□□□□□ -1.96
CIRBP-236	ENST00000592051	LCE1E	Q5T753	118 aa		2.79	□□□□□ -1.96
CIRBP-236	ENST00000592051	LCE3D	Q9BYE3	92 aa		2.78	□□□□□ -1.96
CIRBP-236	ENST00000592051	KRTAP9-9	Q9BYP9	154 aa		2.76	□□□□□ -1.97
CIRBP-236	ENST00000592051	LCE3E	Q5T5B0	92 aa		2.66	□□□□□ -1.98
CIRBP-236	ENST00000592051	KRTAP4-2	Q9BYR5	136 aa		2.66	□□□□□ -1.98
CIRBP-236	ENST00000592051	LCE1B	Q5T7P3	118 aa		2.61	□□□□□ -1.99
CIRBP-236	ENST00000592051	LCE1C	Q5T751	118 aa		2.6	□□□□□ -1.99
CIRBP-236	ENST00000592051	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.41	□□□□□ -2.02
CIRBP-236	ENST00000592051	KRTAP5-11	Q6L8G4	156 aa		2.33	□□□□□ -2.04
CIRBP-236	ENST00000592051	KRTAP4-12	Q9BQ66	201 aa		2.3	□□□□□ -2.04
CIRBP-236	ENST00000592051	KRTAP21-2	Q3LI59	83 aa		2.27	□□□□□ -2.05
CIRBP-236	ENST00000592051	INE1	O15225	51 aa		2.26	□□□□□ -2.05
CIRBP-236	ENST00000592051	PRM1	P04553	51 aa		2.18	□□□□□ -2.06
CIRBP-236	ENST00000592051	LCE1F	Q5T754	118 aa		2.16	□□□□□ -2.06
CIRBP-236	ENST00000592051	PHGR1	C9JFL3	82 aa		2.07	□□□□□ -2.08
CIRBP-236	ENST00000592051	KRTAP4-4	Q9BYR3	166 aa		2.04	□□□□□ -2.08
CIRBP-236	ENST00000592051	MUC19	Q7Z5P9	8384 aa		1.77	□□□□□ -2.13
CIRBP-236	ENST00000592051	KRTAP21-1	Q3LI58	79 aa		1.59	□□□□□ -2.15
CIRBP-236	ENST00000592051	MUC16	Q8WXI7	14507 aa		1.26	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 127.3 ms