RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
SDF2-209ENST00000591903 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
SDF2-209ENST00000591903 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
SDF2-209ENST00000591903 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
SDF2-209ENST00000591903 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
SDF2-209ENST00000591903 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SDF2-209ENST00000591903 TNP1P09430 55 aa3.91□□□□□ -1.78
SDF2-209ENST00000591903 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
SDF2-209ENST00000591903 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
SDF2-209ENST00000591903 MT4P47944 62 aa3.89□□□□□ -1.79
SDF2-209ENST00000591903 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
SDF2-209ENST00000591903 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
SDF2-209ENST00000591903 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
SDF2-209ENST00000591903 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
SDF2-209ENST00000591903 ROMO1P60602 79 aa3.79□□□□□ -1.8
SDF2-209ENST00000591903 MT1EP04732 61 aa3.78□□□□□ -1.8
SDF2-209ENST00000591903 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
SDF2-209ENST00000591903 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
SDF2-209ENST00000591903 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
SDF2-209ENST00000591903 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
SDF2-209ENST00000591903 MT1GP13640 62 aa3.73□□□□□ -1.81
SDF2-209ENST00000591903 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
SDF2-209ENST00000591903 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
SDF2-209ENST00000591903 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
SDF2-209ENST00000591903 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
SDF2-209ENST00000591903 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
SDF2-209ENST00000591903 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
SDF2-209ENST00000591903 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
SDF2-209ENST00000591903 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
SDF2-209ENST00000591903 MT1MQ8N339 61 aa3.63□□□□□ -1.83
SDF2-209ENST00000591903 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
SDF2-209ENST00000591903 MT1LQ93083 61 aa3.57□□□□□ -1.84
SDF2-209ENST00000591903 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
SDF2-209ENST00000591903 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
SDF2-209ENST00000591903 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
SDF2-209ENST00000591903 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
SDF2-209ENST00000591903 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
SDF2-209ENST00000591903 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
SDF2-209ENST00000591903 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
SDF2-209ENST00000591903 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
SDF2-209ENST00000591903 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SDF2-209ENST00000591903 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SDF2-209ENST00000591903 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
SDF2-209ENST00000591903 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
SDF2-209ENST00000591903 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SDF2-209ENST00000591903 H3BS24 57 aa3.27□□□□□ -1.89
SDF2-209ENST00000591903 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SDF2-209ENST00000591903 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
SDF2-209ENST00000591903 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
SDF2-209ENST00000591903 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
SDF2-209ENST00000591903 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
SDF2-209ENST00000591903 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
SDF2-209ENST00000591903 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
SDF2-209ENST00000591903 MT1AP04731 61 aa3.06□□□□□ -1.92
SDF2-209ENST00000591903 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
SDF2-209ENST00000591903 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
SDF2-209ENST00000591903 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
SDF2-209ENST00000591903 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
SDF2-209ENST00000591903 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
SDF2-209ENST00000591903 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
SDF2-209ENST00000591903 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
SDF2-209ENST00000591903 MT3P25713 68 aa2.79□□□□□ -1.96
SDF2-209ENST00000591903 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
SDF2-209ENST00000591903 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SDF2-209ENST00000591903 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SDF2-209ENST00000591903 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
SDF2-209ENST00000591903 INE1O15225 51 aa2.42□□□□□ -2.02
SDF2-209ENST00000591903 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
SDF2-209ENST00000591903 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SDF2-209ENST00000591903 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
SDF2-209ENST00000591903 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
SDF2-209ENST00000591903 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
SDF2-209ENST00000591903 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SDF2-209ENST00000591903 PRM1P04553 51 aa1.91□□□□□ -2.1
SDF2-209ENST00000591903 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
SDF2-209ENST00000591903 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
SDF2-209ENST00000591903 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SDF2-209ENST00000591903 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms