RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
LSM7-207ENST00000591745 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
LSM7-207ENST00000591745 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
LSM7-207ENST00000591745 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
LSM7-207ENST00000591745 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
LSM7-207ENST00000591745 MT1BP07438 61 aa5.84□□□□□ -1.47
LSM7-207ENST00000591745 TNP1P09430 55 aa5.83□□□□□ -1.48
LSM7-207ENST00000591745 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
LSM7-207ENST00000591745 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
LSM7-207ENST00000591745 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
LSM7-207ENST00000591745 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
LSM7-207ENST00000591745 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
LSM7-207ENST00000591745 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
LSM7-207ENST00000591745 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
LSM7-207ENST00000591745 SPRR2EP22531 72 aa5.69□□□□□ -1.5
LSM7-207ENST00000591745 SPRR2BP35325 72 aa5.69□□□□□ -1.5
LSM7-207ENST00000591745 SPRR2AP35326 72 aa5.69□□□□□ -1.5
LSM7-207ENST00000591745 MT1XP80297 61 aa5.68□□□□□ -1.5
LSM7-207ENST00000591745 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.5
LSM7-207ENST00000591745 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
LSM7-207ENST00000591745 MT3P25713 68 aa5.62□□□□□ -1.51
LSM7-207ENST00000591745 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
LSM7-207ENST00000591745 SPRR2DP22532 72 aa5.5□□□□□ -1.53
LSM7-207ENST00000591745 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
LSM7-207ENST00000591745 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
LSM7-207ENST00000591745 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
LSM7-207ENST00000591745 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
LSM7-207ENST00000591745 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
LSM7-207ENST00000591745 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
LSM7-207ENST00000591745 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
LSM7-207ENST00000591745 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
LSM7-207ENST00000591745 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
LSM7-207ENST00000591745 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
LSM7-207ENST00000591745 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
LSM7-207ENST00000591745 MT1EP04732 61 aa5.01□□□□□ -1.61
LSM7-207ENST00000591745 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
LSM7-207ENST00000591745 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
LSM7-207ENST00000591745 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
LSM7-207ENST00000591745 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
LSM7-207ENST00000591745 MT1LQ93083 61 aa4.91□□□□□ -1.62
LSM7-207ENST00000591745 MT4P47944 62 aa4.9□□□□□ -1.63
LSM7-207ENST00000591745 LCE1FQ5T754 118 aa4.9□□□□□ -1.63
LSM7-207ENST00000591745 MT1GP13640 62 aa4.89□□□□□ -1.63
LSM7-207ENST00000591745 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
LSM7-207ENST00000591745 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
LSM7-207ENST00000591745 MT1MQ8N339 61 aa4.71□□□□□ -1.66
LSM7-207ENST00000591745 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
LSM7-207ENST00000591745 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
LSM7-207ENST00000591745 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
LSM7-207ENST00000591745 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
LSM7-207ENST00000591745 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
LSM7-207ENST00000591745 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
LSM7-207ENST00000591745 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
LSM7-207ENST00000591745 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
LSM7-207ENST00000591745 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
LSM7-207ENST00000591745 MT1AP04731 61 aa4.23□□□□□ -1.73
LSM7-207ENST00000591745 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
LSM7-207ENST00000591745 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
LSM7-207ENST00000591745 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
LSM7-207ENST00000591745 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
LSM7-207ENST00000591745 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
LSM7-207ENST00000591745 INE1O15225 51 aa4.08□□□□□ -1.76
LSM7-207ENST00000591745 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
LSM7-207ENST00000591745 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
LSM7-207ENST00000591745 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
LSM7-207ENST00000591745 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
LSM7-207ENST00000591745 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
LSM7-207ENST00000591745 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
LSM7-207ENST00000591745 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
LSM7-207ENST00000591745 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
LSM7-207ENST00000591745 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
LSM7-207ENST00000591745 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
LSM7-207ENST00000591745 PRM1P04553 51 aa3.09□□□□□ -1.91
LSM7-207ENST00000591745 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
LSM7-207ENST00000591745 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
LSM7-207ENST00000591745 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
LSM7-207ENST00000591745 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
LSM7-207ENST00000591745 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 27.3 ms