RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
TCF3-214ENST00000590605 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
TCF3-214ENST00000590605 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
TCF3-214ENST00000590605 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
TCF3-214ENST00000590605 KRTAP2-1Q9BYU5 128 aa5.86□□□□□ -1.47
TCF3-214ENST00000590605 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
TCF3-214ENST00000590605 SPRR2DP22532 72 aa5.84□□□□□ -1.47
TCF3-214ENST00000590605 MT1EP04732 61 aa5.81□□□□□ -1.48
TCF3-214ENST00000590605 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
TCF3-214ENST00000590605 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
TCF3-214ENST00000590605 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
TCF3-214ENST00000590605 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
TCF3-214ENST00000590605 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
TCF3-214ENST00000590605 MT1GP13640 62 aa5.63□□□□□ -1.51
TCF3-214ENST00000590605 MT1LQ93083 61 aa5.63□□□□□ -1.51
TCF3-214ENST00000590605 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
TCF3-214ENST00000590605 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
TCF3-214ENST00000590605 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
TCF3-214ENST00000590605 MT1MQ8N339 61 aa5.48□□□□□ -1.53
TCF3-214ENST00000590605 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
TCF3-214ENST00000590605 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
TCF3-214ENST00000590605 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
TCF3-214ENST00000590605 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
TCF3-214ENST00000590605 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
TCF3-214ENST00000590605 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
TCF3-214ENST00000590605 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
TCF3-214ENST00000590605 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
TCF3-214ENST00000590605 MT4P47944 62 aa5.13□□□□□ -1.59
TCF3-214ENST00000590605 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
TCF3-214ENST00000590605 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
TCF3-214ENST00000590605 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
TCF3-214ENST00000590605 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
TCF3-214ENST00000590605 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
TCF3-214ENST00000590605 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
TCF3-214ENST00000590605 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
TCF3-214ENST00000590605 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
TCF3-214ENST00000590605 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
TCF3-214ENST00000590605 MT1AP04731 61 aa4.82□□□□□ -1.64
TCF3-214ENST00000590605 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
TCF3-214ENST00000590605 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
TCF3-214ENST00000590605 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
TCF3-214ENST00000590605 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
TCF3-214ENST00000590605 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
TCF3-214ENST00000590605 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
TCF3-214ENST00000590605 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
TCF3-214ENST00000590605 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
TCF3-214ENST00000590605 H3BS24 57 aa4.56□□□□□ -1.68
TCF3-214ENST00000590605 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
TCF3-214ENST00000590605 MT3P25713 68 aa4.42□□□□□ -1.7
TCF3-214ENST00000590605 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
TCF3-214ENST00000590605 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
TCF3-214ENST00000590605 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
TCF3-214ENST00000590605 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
TCF3-214ENST00000590605 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.74
TCF3-214ENST00000590605 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
TCF3-214ENST00000590605 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
TCF3-214ENST00000590605 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
TCF3-214ENST00000590605 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
TCF3-214ENST00000590605 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
TCF3-214ENST00000590605 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
TCF3-214ENST00000590605 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
TCF3-214ENST00000590605 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TCF3-214ENST00000590605 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
TCF3-214ENST00000590605 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
TCF3-214ENST00000590605 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
TCF3-214ENST00000590605 INE1O15225 51 aa3.62□□□□□ -1.83
TCF3-214ENST00000590605 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
TCF3-214ENST00000590605 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
TCF3-214ENST00000590605 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
TCF3-214ENST00000590605 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
TCF3-214ENST00000590605 PRM1P04553 51 aa3.15□□□□□ -1.91
TCF3-214ENST00000590605 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
TCF3-214ENST00000590605 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
TCF3-214ENST00000590605 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
TCF3-214ENST00000590605 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
TCF3-214ENST00000590605 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TCF3-214ENST00000590605 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
TCF3-214ENST00000590605 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms