RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
TMC6-215ENST00000590494 A0A0D9SG42 100 aa4.85□□□□□ -1.63
TMC6-215ENST00000590494 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
TMC6-215ENST00000590494 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
TMC6-215ENST00000590494 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
TMC6-215ENST00000590494 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
TMC6-215ENST00000590494 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
TMC6-215ENST00000590494 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
TMC6-215ENST00000590494 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
TMC6-215ENST00000590494 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
TMC6-215ENST00000590494 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
TMC6-215ENST00000590494 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
TMC6-215ENST00000590494 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
TMC6-215ENST00000590494 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
TMC6-215ENST00000590494 MT4P47944 62 aa4.58□□□□□ -1.68
TMC6-215ENST00000590494 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
TMC6-215ENST00000590494 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
TMC6-215ENST00000590494 TNP1P09430 55 aa4.48□□□□□ -1.69
TMC6-215ENST00000590494 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
TMC6-215ENST00000590494 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
TMC6-215ENST00000590494 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
TMC6-215ENST00000590494 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
TMC6-215ENST00000590494 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
TMC6-215ENST00000590494 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
TMC6-215ENST00000590494 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
TMC6-215ENST00000590494 MT1EP04732 61 aa4.33□□□□□ -1.72
TMC6-215ENST00000590494 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
TMC6-215ENST00000590494 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
TMC6-215ENST00000590494 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
TMC6-215ENST00000590494 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
TMC6-215ENST00000590494 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
TMC6-215ENST00000590494 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
TMC6-215ENST00000590494 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
TMC6-215ENST00000590494 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
TMC6-215ENST00000590494 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
TMC6-215ENST00000590494 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
TMC6-215ENST00000590494 MT1LQ93083 61 aa4.18□□□□□ -1.74
TMC6-215ENST00000590494 MT1GP13640 62 aa4.17□□□□□ -1.74
TMC6-215ENST00000590494 MT1MQ8N339 61 aa4.1□□□□□ -1.75
TMC6-215ENST00000590494 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
TMC6-215ENST00000590494 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
TMC6-215ENST00000590494 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
TMC6-215ENST00000590494 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
TMC6-215ENST00000590494 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
TMC6-215ENST00000590494 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
TMC6-215ENST00000590494 INE1O15225 51 aa3.91□□□□□ -1.78
TMC6-215ENST00000590494 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
TMC6-215ENST00000590494 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
TMC6-215ENST00000590494 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
TMC6-215ENST00000590494 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
TMC6-215ENST00000590494 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
TMC6-215ENST00000590494 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
TMC6-215ENST00000590494 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
TMC6-215ENST00000590494 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
TMC6-215ENST00000590494 MT1AP04731 61 aa3.56□□□□□ -1.84
TMC6-215ENST00000590494 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
TMC6-215ENST00000590494 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
TMC6-215ENST00000590494 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
TMC6-215ENST00000590494 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
TMC6-215ENST00000590494 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
TMC6-215ENST00000590494 MT3P25713 68 aa3.25□□□□□ -1.89
TMC6-215ENST00000590494 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
TMC6-215ENST00000590494 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
TMC6-215ENST00000590494 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
TMC6-215ENST00000590494 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
TMC6-215ENST00000590494 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
TMC6-215ENST00000590494 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
TMC6-215ENST00000590494 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
TMC6-215ENST00000590494 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
TMC6-215ENST00000590494 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
TMC6-215ENST00000590494 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
TMC6-215ENST00000590494 PRM1P04553 51 aa2.5□□□□□ -2.01
TMC6-215ENST00000590494 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
TMC6-215ENST00000590494 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TMC6-215ENST00000590494 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
TMC6-215ENST00000590494 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
TMC6-215ENST00000590494 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
TMC6-215ENST00000590494 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms