RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 KRTAP19-7Q3SYF9 63 aa5.65□□□□□ -1.5
DDX39A-211ENST00000590239 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
DDX39A-211ENST00000590239 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
DDX39A-211ENST00000590239 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
DDX39A-211ENST00000590239 MT1EP04732 61 aa5.57□□□□□ -1.52
DDX39A-211ENST00000590239 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
DDX39A-211ENST00000590239 SPRR2EP22531 72 aa5.51□□□□□ -1.53
DDX39A-211ENST00000590239 SPRR2BP35325 72 aa5.51□□□□□ -1.53
DDX39A-211ENST00000590239 SPRR2AP35326 72 aa5.51□□□□□ -1.53
DDX39A-211ENST00000590239 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
DDX39A-211ENST00000590239 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
DDX39A-211ENST00000590239 MT1LQ93083 61 aa5.42□□□□□ -1.54
DDX39A-211ENST00000590239 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
DDX39A-211ENST00000590239 MT1GP13640 62 aa5.36□□□□□ -1.55
DDX39A-211ENST00000590239 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
DDX39A-211ENST00000590239 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
DDX39A-211ENST00000590239 SPRR2DP22532 72 aa5.34□□□□□ -1.55
DDX39A-211ENST00000590239 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
DDX39A-211ENST00000590239 MT1MQ8N339 61 aa5.27□□□□□ -1.57
DDX39A-211ENST00000590239 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
DDX39A-211ENST00000590239 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
DDX39A-211ENST00000590239 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
DDX39A-211ENST00000590239 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
DDX39A-211ENST00000590239 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
DDX39A-211ENST00000590239 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
DDX39A-211ENST00000590239 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
DDX39A-211ENST00000590239 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
DDX39A-211ENST00000590239 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
DDX39A-211ENST00000590239 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
DDX39A-211ENST00000590239 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
DDX39A-211ENST00000590239 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
DDX39A-211ENST00000590239 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
DDX39A-211ENST00000590239 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
DDX39A-211ENST00000590239 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
DDX39A-211ENST00000590239 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
DDX39A-211ENST00000590239 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
DDX39A-211ENST00000590239 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
DDX39A-211ENST00000590239 MT4P47944 62 aa4.7□□□□□ -1.66
DDX39A-211ENST00000590239 MT1AP04731 61 aa4.63□□□□□ -1.67
DDX39A-211ENST00000590239 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
DDX39A-211ENST00000590239 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
DDX39A-211ENST00000590239 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
DDX39A-211ENST00000590239 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
DDX39A-211ENST00000590239 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
DDX39A-211ENST00000590239 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
DDX39A-211ENST00000590239 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
DDX39A-211ENST00000590239 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
DDX39A-211ENST00000590239 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
DDX39A-211ENST00000590239 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
DDX39A-211ENST00000590239 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
DDX39A-211ENST00000590239 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
DDX39A-211ENST00000590239 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
DDX39A-211ENST00000590239 MT3P25713 68 aa4.21□□□□□ -1.74
DDX39A-211ENST00000590239 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
DDX39A-211ENST00000590239 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
DDX39A-211ENST00000590239 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
DDX39A-211ENST00000590239 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
DDX39A-211ENST00000590239 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
DDX39A-211ENST00000590239 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
DDX39A-211ENST00000590239 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
DDX39A-211ENST00000590239 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
DDX39A-211ENST00000590239 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
DDX39A-211ENST00000590239 H3BS24 57 aa3.6□□□□□ -1.83
DDX39A-211ENST00000590239 INE1O15225 51 aa3.57□□□□□ -1.84
DDX39A-211ENST00000590239 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
DDX39A-211ENST00000590239 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
DDX39A-211ENST00000590239 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
DDX39A-211ENST00000590239 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
DDX39A-211ENST00000590239 PRM1P04553 51 aa3.1□□□□□ -1.91
DDX39A-211ENST00000590239 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
DDX39A-211ENST00000590239 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
DDX39A-211ENST00000590239 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
DDX39A-211ENST00000590239 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
DDX39A-211ENST00000590239 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
DDX39A-211ENST00000590239 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
DDX39A-211ENST00000590239 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
DDX39A-211ENST00000590239 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
DDX39A-211ENST00000590239 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 60.8 ms