RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 A8MUU9 505 aa3.83□□□□□ -1.8
SMAD4-209ENST00000589941 C20orf166-AS1Q96NR2 134 aa3.83□□□□□ -1.8
SMAD4-209ENST00000589941 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
SMAD4-209ENST00000589941 ADM2Q7Z4H4 148 aa3.8□□□□□ -1.8
SMAD4-209ENST00000589941 H0YAA0 97 aa3.76□□□□□ -1.81
SMAD4-209ENST00000589941 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
SMAD4-209ENST00000589941 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
SMAD4-209ENST00000589941 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
SMAD4-209ENST00000589941 A0A1B0GU33 70 aa3.71□□□□□ -1.82
SMAD4-209ENST00000589941 CSAG1Q6PB30 78 aa3.71□□□□□ -1.82
SMAD4-209ENST00000589941 SPRR2EP22531 72 aa3.67□□□□□ -1.82
SMAD4-209ENST00000589941 SPRR2BP35325 72 aa3.67□□□□□ -1.82
SMAD4-209ENST00000589941 SPRR2AP35326 72 aa3.67□□□□□ -1.82
SMAD4-209ENST00000589941 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
SMAD4-209ENST00000589941 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
SMAD4-209ENST00000589941 K7ERS5 55 aa3.59□□□□□ -1.83
SMAD4-209ENST00000589941 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
SMAD4-209ENST00000589941 ROMO1P60602 79 aa3.57□□□□□ -1.84
SMAD4-209ENST00000589941 MT1BP07438 61 aa3.55□□□□□ -1.84
SMAD4-209ENST00000589941 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SMAD4-209ENST00000589941 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
SMAD4-209ENST00000589941 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
SMAD4-209ENST00000589941 S4R3F8 94 aa3.52□□□□□ -1.85
SMAD4-209ENST00000589941 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-209ENST00000589941 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
SMAD4-209ENST00000589941 P0C880 135 aa3.47□□□□□ -1.85
SMAD4-209ENST00000589941 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
SMAD4-209ENST00000589941 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SMAD4-209ENST00000589941 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
SMAD4-209ENST00000589941 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
SMAD4-209ENST00000589941 M0QZ58 72 aa3.43□□□□□ -1.86
SMAD4-209ENST00000589941 A0A0D9SG42 100 aa3.41□□□□□ -1.86
SMAD4-209ENST00000589941 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
SMAD4-209ENST00000589941 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
SMAD4-209ENST00000589941 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
SMAD4-209ENST00000589941 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
SMAD4-209ENST00000589941 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
SMAD4-209ENST00000589941 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
SMAD4-209ENST00000589941 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
SMAD4-209ENST00000589941 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
SMAD4-209ENST00000589941 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
SMAD4-209ENST00000589941 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
SMAD4-209ENST00000589941 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
SMAD4-209ENST00000589941 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SMAD4-209ENST00000589941 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
SMAD4-209ENST00000589941 R4GN34 69 aa3.23□□□□□ -1.89
SMAD4-209ENST00000589941 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
SMAD4-209ENST00000589941 MT4P47944 62 aa3.18□□□□□ -1.9
SMAD4-209ENST00000589941 MT1XP80297 61 aa3.18□□□□□ -1.9
SMAD4-209ENST00000589941 PLAC4Q8WY50 150 aa3.15□□□□□ -1.91
SMAD4-209ENST00000589941 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
SMAD4-209ENST00000589941 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
SMAD4-209ENST00000589941 PRO2289Q9P1D8 64 aa3.04□□□□□ -1.92
SMAD4-209ENST00000589941 TNP1P09430 55 aa3.02□□□□□ -1.93
SMAD4-209ENST00000589941 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
SMAD4-209ENST00000589941 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
SMAD4-209ENST00000589941 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
SMAD4-209ENST00000589941 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
SMAD4-209ENST00000589941 INE1O15225 51 aa2.84□□□□□ -1.95
SMAD4-209ENST00000589941 MT1EP04732 61 aa2.84□□□□□ -1.95
SMAD4-209ENST00000589941 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
SMAD4-209ENST00000589941 MT1MQ8N339 61 aa2.75□□□□□ -1.97
SMAD4-209ENST00000589941 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
SMAD4-209ENST00000589941 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
SMAD4-209ENST00000589941 MT1GP13640 62 aa2.71□□□□□ -1.98
SMAD4-209ENST00000589941 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SMAD4-209ENST00000589941 MT1LQ93083 61 aa2.62□□□□□ -1.99
SMAD4-209ENST00000589941 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
SMAD4-209ENST00000589941 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
SMAD4-209ENST00000589941 KRTAP12-4P60329 112 aa2.54□□□□□ -2
SMAD4-209ENST00000589941 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SMAD4-209ENST00000589941 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
SMAD4-209ENST00000589941 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
SMAD4-209ENST00000589941 MT1AP04731 61 aa2.19□□□□□ -2.06
SMAD4-209ENST00000589941 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SMAD4-209ENST00000589941 PRM1P04553 51 aa1.88□□□□□ -2.11
SMAD4-209ENST00000589941 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SMAD4-209ENST00000589941 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 36.4 ms