RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 KMT2DO14686 5537 aa4.79□□□□□ -1.64
CCBE1-203ENST00000589116 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
CCBE1-203ENST00000589116 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
CCBE1-203ENST00000589116 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
CCBE1-203ENST00000589116 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
CCBE1-203ENST00000589116 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
CCBE1-203ENST00000589116 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
CCBE1-203ENST00000589116 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
CCBE1-203ENST00000589116 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
CCBE1-203ENST00000589116 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
CCBE1-203ENST00000589116 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
CCBE1-203ENST00000589116 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
CCBE1-203ENST00000589116 SPRR2EP22531 72 aa4.62□□□□□ -1.67
CCBE1-203ENST00000589116 SPRR2BP35325 72 aa4.62□□□□□ -1.67
CCBE1-203ENST00000589116 SPRR2AP35326 72 aa4.62□□□□□ -1.67
CCBE1-203ENST00000589116 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
CCBE1-203ENST00000589116 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
CCBE1-203ENST00000589116 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
CCBE1-203ENST00000589116 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
CCBE1-203ENST00000589116 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
CCBE1-203ENST00000589116 SPRR2DP22532 72 aa4.48□□□□□ -1.69
CCBE1-203ENST00000589116 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
CCBE1-203ENST00000589116 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
CCBE1-203ENST00000589116 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
CCBE1-203ENST00000589116 MT1EP04732 61 aa4.38□□□□□ -1.71
CCBE1-203ENST00000589116 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
CCBE1-203ENST00000589116 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
CCBE1-203ENST00000589116 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
CCBE1-203ENST00000589116 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
CCBE1-203ENST00000589116 MT1LQ93083 61 aa4.29□□□□□ -1.72
CCBE1-203ENST00000589116 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
CCBE1-203ENST00000589116 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
CCBE1-203ENST00000589116 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
CCBE1-203ENST00000589116 MT1GP13640 62 aa4.18□□□□□ -1.74
CCBE1-203ENST00000589116 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
CCBE1-203ENST00000589116 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
CCBE1-203ENST00000589116 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
CCBE1-203ENST00000589116 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CCBE1-203ENST00000589116 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
CCBE1-203ENST00000589116 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
CCBE1-203ENST00000589116 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
CCBE1-203ENST00000589116 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
CCBE1-203ENST00000589116 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
CCBE1-203ENST00000589116 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
CCBE1-203ENST00000589116 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
CCBE1-203ENST00000589116 MT4P47944 62 aa3.97□□□□□ -1.77
CCBE1-203ENST00000589116 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CCBE1-203ENST00000589116 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
CCBE1-203ENST00000589116 MT1AP04731 61 aa3.66□□□□□ -1.82
CCBE1-203ENST00000589116 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
CCBE1-203ENST00000589116 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
CCBE1-203ENST00000589116 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.85
CCBE1-203ENST00000589116 KRTAP12-4P60329 112 aa3.46□□□□□ -1.85
CCBE1-203ENST00000589116 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
CCBE1-203ENST00000589116 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
CCBE1-203ENST00000589116 INE1O15225 51 aa3.38□□□□□ -1.87
CCBE1-203ENST00000589116 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
CCBE1-203ENST00000589116 MT3P25713 68 aa3.32□□□□□ -1.88
CCBE1-203ENST00000589116 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
CCBE1-203ENST00000589116 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
CCBE1-203ENST00000589116 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
CCBE1-203ENST00000589116 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
CCBE1-203ENST00000589116 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
CCBE1-203ENST00000589116 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
CCBE1-203ENST00000589116 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
CCBE1-203ENST00000589116 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CCBE1-203ENST00000589116 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
CCBE1-203ENST00000589116 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
CCBE1-203ENST00000589116 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CCBE1-203ENST00000589116 PRM1P04553 51 aa2.7□□□□□ -1.98
CCBE1-203ENST00000589116 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
CCBE1-203ENST00000589116 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
CCBE1-203ENST00000589116 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CCBE1-203ENST00000589116 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CCBE1-203ENST00000589116 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CCBE1-203ENST00000589116 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
CCBE1-203ENST00000589116 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
CCBE1-203ENST00000589116 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 40.1 ms