RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
APOC1-204ENST00000589078 MT1EP04732 61 aa3.58□□□□□ -1.84
APOC1-204ENST00000589078 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
APOC1-204ENST00000589078 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
APOC1-204ENST00000589078 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
APOC1-204ENST00000589078 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
APOC1-204ENST00000589078 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
APOC1-204ENST00000589078 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
APOC1-204ENST00000589078 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
APOC1-204ENST00000589078 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
APOC1-204ENST00000589078 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
APOC1-204ENST00000589078 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
APOC1-204ENST00000589078 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
APOC1-204ENST00000589078 MT1GP13640 62 aa3.48□□□□□ -1.85
APOC1-204ENST00000589078 MT4P47944 62 aa3.48□□□□□ -1.85
APOC1-204ENST00000589078 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
APOC1-204ENST00000589078 MT1LQ93083 61 aa3.44□□□□□ -1.86
APOC1-204ENST00000589078 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
APOC1-204ENST00000589078 ROMO1P60602 79 aa3.42□□□□□ -1.86
APOC1-204ENST00000589078 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
APOC1-204ENST00000589078 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
APOC1-204ENST00000589078 MT1MQ8N339 61 aa3.39□□□□□ -1.87
APOC1-204ENST00000589078 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
APOC1-204ENST00000589078 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
APOC1-204ENST00000589078 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
APOC1-204ENST00000589078 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
APOC1-204ENST00000589078 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
APOC1-204ENST00000589078 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
APOC1-204ENST00000589078 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
APOC1-204ENST00000589078 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
APOC1-204ENST00000589078 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
APOC1-204ENST00000589078 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
APOC1-204ENST00000589078 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
APOC1-204ENST00000589078 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
APOC1-204ENST00000589078 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
APOC1-204ENST00000589078 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
APOC1-204ENST00000589078 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
APOC1-204ENST00000589078 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
APOC1-204ENST00000589078 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
APOC1-204ENST00000589078 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
APOC1-204ENST00000589078 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
APOC1-204ENST00000589078 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
APOC1-204ENST00000589078 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
APOC1-204ENST00000589078 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
APOC1-204ENST00000589078 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
APOC1-204ENST00000589078 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
APOC1-204ENST00000589078 MT1AP04731 61 aa2.94□□□□□ -1.94
APOC1-204ENST00000589078 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
APOC1-204ENST00000589078 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
APOC1-204ENST00000589078 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
APOC1-204ENST00000589078 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
APOC1-204ENST00000589078 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
APOC1-204ENST00000589078 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
APOC1-204ENST00000589078 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
APOC1-204ENST00000589078 MT3P25713 68 aa2.71□□□□□ -1.98
APOC1-204ENST00000589078 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
APOC1-204ENST00000589078 LUZP6Q538Z0 58 aa2.53□□□□□ -2
APOC1-204ENST00000589078 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
APOC1-204ENST00000589078 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
APOC1-204ENST00000589078 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
APOC1-204ENST00000589078 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
APOC1-204ENST00000589078 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
APOC1-204ENST00000589078 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
APOC1-204ENST00000589078 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
APOC1-204ENST00000589078 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
APOC1-204ENST00000589078 H3BS24 57 aa2.17□□□□□ -2.06
APOC1-204ENST00000589078 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
APOC1-204ENST00000589078 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
APOC1-204ENST00000589078 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
APOC1-204ENST00000589078 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
APOC1-204ENST00000589078 A0A0A0MQY5 61 aa2.01□□□□□ -2.09
APOC1-204ENST00000589078 INE1O15225 51 aa1.95□□□□□ -2.1
APOC1-204ENST00000589078 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
APOC1-204ENST00000589078 PRM1P04553 51 aa1.74□□□□□ -2.13
APOC1-204ENST00000589078 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
APOC1-204ENST00000589078 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
APOC1-204ENST00000589078 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
APOC1-204ENST00000589078 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms