RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
RFX1-204ENST00000588885 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
RFX1-204ENST00000588885 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
RFX1-204ENST00000588885 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
RFX1-204ENST00000588885 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
RFX1-204ENST00000588885 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
RFX1-204ENST00000588885 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
RFX1-204ENST00000588885 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
RFX1-204ENST00000588885 K7ERS5 55 aa4.63□□□□□ -1.67
RFX1-204ENST00000588885 SPRR2DP22532 72 aa4.61□□□□□ -1.67
RFX1-204ENST00000588885 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
RFX1-204ENST00000588885 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
RFX1-204ENST00000588885 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
RFX1-204ENST00000588885 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
RFX1-204ENST00000588885 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
RFX1-204ENST00000588885 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
RFX1-204ENST00000588885 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
RFX1-204ENST00000588885 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
RFX1-204ENST00000588885 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
RFX1-204ENST00000588885 ROMO1P60602 79 aa4.45□□□□□ -1.7
RFX1-204ENST00000588885 KRTAP4-4Q9BYR3 166 aa4.42□□□□□ -1.7
RFX1-204ENST00000588885 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
RFX1-204ENST00000588885 TNP1P09430 55 aa4.39□□□□□ -1.71
RFX1-204ENST00000588885 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
RFX1-204ENST00000588885 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
RFX1-204ENST00000588885 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
RFX1-204ENST00000588885 MT1EP04732 61 aa4.29□□□□□ -1.72
RFX1-204ENST00000588885 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
RFX1-204ENST00000588885 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
RFX1-204ENST00000588885 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
RFX1-204ENST00000588885 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
RFX1-204ENST00000588885 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
RFX1-204ENST00000588885 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
RFX1-204ENST00000588885 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
RFX1-204ENST00000588885 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
RFX1-204ENST00000588885 MT1GP13640 62 aa4.14□□□□□ -1.75
RFX1-204ENST00000588885 MT1LQ93083 61 aa4.1□□□□□ -1.75
RFX1-204ENST00000588885 MT1MQ8N339 61 aa4.09□□□□□ -1.75
RFX1-204ENST00000588885 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
RFX1-204ENST00000588885 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
RFX1-204ENST00000588885 MT4P47944 62 aa4.05□□□□□ -1.76
RFX1-204ENST00000588885 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
RFX1-204ENST00000588885 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
RFX1-204ENST00000588885 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
RFX1-204ENST00000588885 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
RFX1-204ENST00000588885 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
RFX1-204ENST00000588885 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
RFX1-204ENST00000588885 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
RFX1-204ENST00000588885 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
RFX1-204ENST00000588885 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
RFX1-204ENST00000588885 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
RFX1-204ENST00000588885 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
RFX1-204ENST00000588885 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
RFX1-204ENST00000588885 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
RFX1-204ENST00000588885 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
RFX1-204ENST00000588885 MT3P25713 68 aa3.5□□□□□ -1.85
RFX1-204ENST00000588885 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
RFX1-204ENST00000588885 MT1AP04731 61 aa3.48□□□□□ -1.85
RFX1-204ENST00000588885 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
RFX1-204ENST00000588885 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
RFX1-204ENST00000588885 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
RFX1-204ENST00000588885 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
RFX1-204ENST00000588885 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
RFX1-204ENST00000588885 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
RFX1-204ENST00000588885 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
RFX1-204ENST00000588885 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
RFX1-204ENST00000588885 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
RFX1-204ENST00000588885 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
RFX1-204ENST00000588885 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
RFX1-204ENST00000588885 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
RFX1-204ENST00000588885 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
RFX1-204ENST00000588885 INE1O15225 51 aa2.63□□□□□ -1.99
RFX1-204ENST00000588885 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
RFX1-204ENST00000588885 PRM1P04553 51 aa2.33□□□□□ -2.04
RFX1-204ENST00000588885 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
RFX1-204ENST00000588885 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
RFX1-204ENST00000588885 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RFX1-204ENST00000588885 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 116.2 ms