RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
CHUK-203ENST00000588656 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
CHUK-203ENST00000588656 A0A1B0GU69 56 aa2.58□□□□□ -2
CHUK-203ENST00000588656 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
CHUK-203ENST00000588656 MDN1Q9NU22 5596 aa2.56□□□□□ -2
CHUK-203ENST00000588656 MT1BP07438 61 aa2.54□□□□□ -2
CHUK-203ENST00000588656 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
CHUK-203ENST00000588656 Q8N9L7 120 aa2.54□□□□□ -2
CHUK-203ENST00000588656 KMT2DO14686 5537 aa2.54□□□□□ -2
CHUK-203ENST00000588656 H1FX-AS1Q4G0G2 97 aa2.53□□□□□ -2
CHUK-203ENST00000588656 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
CHUK-203ENST00000588656 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CHUK-203ENST00000588656 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
CHUK-203ENST00000588656 ACYP2P14621 99 aa2.48□□□□□ -2.01
CHUK-203ENST00000588656 R4GN34 69 aa2.48□□□□□ -2.01
CHUK-203ENST00000588656 MRPL34Q9BQ48 92 aaKnown RBP2.47□□□□□ -2.01
CHUK-203ENST00000588656 K7EQZ3 153 aa2.46□□□□□ -2.02
CHUK-203ENST00000588656 SPRR2EP22531 72 aa2.46□□□□□ -2.02
CHUK-203ENST00000588656 SPRR2BP35325 72 aa2.46□□□□□ -2.02
CHUK-203ENST00000588656 SPRR2AP35326 72 aa2.46□□□□□ -2.02
CHUK-203ENST00000588656 TP53AIP1Q9HCN2 124 aa2.46□□□□□ -2.02
CHUK-203ENST00000588656 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
CHUK-203ENST00000588656 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
CHUK-203ENST00000588656 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
CHUK-203ENST00000588656 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
CHUK-203ENST00000588656 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
CHUK-203ENST00000588656 S4R3F8 94 aa2.43□□□□□ -2.02
CHUK-203ENST00000588656 INE1O15225 51 aa2.41□□□□□ -2.02
CHUK-203ENST00000588656 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
CHUK-203ENST00000588656 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
CHUK-203ENST00000588656 SPRR2DP22532 72 aa2.37□□□□□ -2.03
CHUK-203ENST00000588656 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
CHUK-203ENST00000588656 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
CHUK-203ENST00000588656 MT1XP80297 61 aa2.34□□□□□ -2.03
CHUK-203ENST00000588656 CRIPTQ9P021 101 aa2.33□□□□□ -2.04
CHUK-203ENST00000588656 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CHUK-203ENST00000588656 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
CHUK-203ENST00000588656 H0YAA0 97 aa2.3□□□□□ -2.04
CHUK-203ENST00000588656 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
CHUK-203ENST00000588656 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
CHUK-203ENST00000588656 M0QZ58 72 aa2.21□□□□□ -2.06
CHUK-203ENST00000588656 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
CHUK-203ENST00000588656 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
CHUK-203ENST00000588656 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
CHUK-203ENST00000588656 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
CHUK-203ENST00000588656 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CHUK-203ENST00000588656 MT4P47944 62 aa2.12□□□□□ -2.07
CHUK-203ENST00000588656 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
CHUK-203ENST00000588656 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
CHUK-203ENST00000588656 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
CHUK-203ENST00000588656 MT1EP04732 61 aa2.07□□□□□ -2.08
CHUK-203ENST00000588656 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
CHUK-203ENST00000588656 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
CHUK-203ENST00000588656 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
CHUK-203ENST00000588656 MT1MQ8N339 61 aa2□□□□□ -2.09
CHUK-203ENST00000588656 A0A0D9SG42 100 aa1.98□□□□□ -2.09
CHUK-203ENST00000588656 MT1GP13640 62 aa1.97□□□□□ -2.09
CHUK-203ENST00000588656 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
CHUK-203ENST00000588656 MT1LQ93083 61 aa1.96□□□□□ -2.1
CHUK-203ENST00000588656 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
CHUK-203ENST00000588656 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
CHUK-203ENST00000588656 KRTAP12-1P59990 96 aa1.91□□□□□ -2.1
CHUK-203ENST00000588656 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
CHUK-203ENST00000588656 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.12
CHUK-203ENST00000588656 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
CHUK-203ENST00000588656 TNP1P09430 55 aa1.77□□□□□ -2.13
CHUK-203ENST00000588656 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
CHUK-203ENST00000588656 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
CHUK-203ENST00000588656 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
CHUK-203ENST00000588656 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
CHUK-203ENST00000588656 KRTAP6-1Q3LI64 71 aa1.69□□□□□ -2.14
CHUK-203ENST00000588656 MT1AP04731 61 aa1.64□□□□□ -2.15
CHUK-203ENST00000588656 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CHUK-203ENST00000588656 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
CHUK-203ENST00000588656 PRM1P04553 51 aa1.27□□□□□ -2.21
CHUK-203ENST00000588656 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
CHUK-203ENST00000588656 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
CHUK-203ENST00000588656 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 71.1 ms