RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
SDF2-205ENST00000587629 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
SDF2-205ENST00000587629 SPTSSBQ8NFR3 76 aa2.66□□□□□ -1.98
SDF2-205ENST00000587629 SPRR2DP22532 72 aa2.65□□□□□ -1.99
SDF2-205ENST00000587629 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
SDF2-205ENST00000587629 A0A1B0GU69 56 aa2.63□□□□□ -1.99
SDF2-205ENST00000587629 UQCR11O14957 56 aa2.63□□□□□ -1.99
SDF2-205ENST00000587629 P0C880 135 aa2.63□□□□□ -1.99
SDF2-205ENST00000587629 R4GN34 69 aa2.63□□□□□ -1.99
SDF2-205ENST00000587629 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
SDF2-205ENST00000587629 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
SDF2-205ENST00000587629 SPATA8Q6RVD6 105 aa2.62□□□□□ -1.99
SDF2-205ENST00000587629 M0QZ58 72 aa2.61□□□□□ -1.99
SDF2-205ENST00000587629 MIR22HGQ0VDD5 57 aa2.58□□□□□ -2
SDF2-205ENST00000587629 A8MU10 97 aa2.55□□□□□ -2
SDF2-205ENST00000587629 KRTAP10-12P60413 245 aa2.54□□□□□ -2
SDF2-205ENST00000587629 K7ERS5 55 aa2.51□□□□□ -2.01
SDF2-205ENST00000587629 A0A1B0GU33 70 aa2.48□□□□□ -2.01
SDF2-205ENST00000587629 MT3P25713 68 aa2.48□□□□□ -2.01
SDF2-205ENST00000587629 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
SDF2-205ENST00000587629 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
SDF2-205ENST00000587629 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
SDF2-205ENST00000587629 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
SDF2-205ENST00000587629 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
SDF2-205ENST00000587629 PRAC1Q96KF2 57 aa2.4□□□□□ -2.03
SDF2-205ENST00000587629 MT1EP04732 61 aa2.39□□□□□ -2.03
SDF2-205ENST00000587629 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
SDF2-205ENST00000587629 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
SDF2-205ENST00000587629 ROMO1P60602 79 aa2.37□□□□□ -2.03
SDF2-205ENST00000587629 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
SDF2-205ENST00000587629 A0A0D9SG42 100 aa2.35□□□□□ -2.03
SDF2-205ENST00000587629 MT4P47944 62 aa2.35□□□□□ -2.03
SDF2-205ENST00000587629 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
SDF2-205ENST00000587629 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
SDF2-205ENST00000587629 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
SDF2-205ENST00000587629 MT1GP13640 62 aa2.31□□□□□ -2.04
SDF2-205ENST00000587629 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
SDF2-205ENST00000587629 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
SDF2-205ENST00000587629 MT1MQ8N339 61 aa2.29□□□□□ -2.04
SDF2-205ENST00000587629 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
SDF2-205ENST00000587629 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
SDF2-205ENST00000587629 MT1LQ93083 61 aa2.27□□□□□ -2.05
SDF2-205ENST00000587629 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
SDF2-205ENST00000587629 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
SDF2-205ENST00000587629 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
SDF2-205ENST00000587629 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
SDF2-205ENST00000587629 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
SDF2-205ENST00000587629 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
SDF2-205ENST00000587629 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
SDF2-205ENST00000587629 TNP1P09430 55 aa2.17□□□□□ -2.06
SDF2-205ENST00000587629 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
SDF2-205ENST00000587629 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
SDF2-205ENST00000587629 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
SDF2-205ENST00000587629 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
SDF2-205ENST00000587629 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
SDF2-205ENST00000587629 NDUFAF8A1L188 74 aa2.08□□□□□ -2.08
SDF2-205ENST00000587629 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
SDF2-205ENST00000587629 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
SDF2-205ENST00000587629 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
SDF2-205ENST00000587629 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
SDF2-205ENST00000587629 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SDF2-205ENST00000587629 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
SDF2-205ENST00000587629 MT1AP04731 61 aa1.91□□□□□ -2.1
SDF2-205ENST00000587629 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
SDF2-205ENST00000587629 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
SDF2-205ENST00000587629 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
SDF2-205ENST00000587629 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
SDF2-205ENST00000587629 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
SDF2-205ENST00000587629 INE1O15225 51 aa1.84□□□□□ -2.11
SDF2-205ENST00000587629 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
SDF2-205ENST00000587629 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
SDF2-205ENST00000587629 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
SDF2-205ENST00000587629 LCE3DQ9BYE3 92 aa1.46□□□□□ -2.18
SDF2-205ENST00000587629 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
SDF2-205ENST00000587629 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
SDF2-205ENST00000587629 PRM1P04553 51 aa1.2□□□□□ -2.22
SDF2-205ENST00000587629 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
SDF2-205ENST00000587629 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 92.6 ms