RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 MT1EP04732 61 aa6.39□□□□□ -1.39
DNMT1-212ENST00000587197 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
DNMT1-212ENST00000587197 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
DNMT1-212ENST00000587197 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
DNMT1-212ENST00000587197 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
DNMT1-212ENST00000587197 ROMO1P60602 79 aa6.24□□□□□ -1.41
DNMT1-212ENST00000587197 MT1GP13640 62 aa6.19□□□□□ -1.42
DNMT1-212ENST00000587197 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
DNMT1-212ENST00000587197 MT1LQ93083 61 aa6.16□□□□□ -1.42
DNMT1-212ENST00000587197 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
DNMT1-212ENST00000587197 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
DNMT1-212ENST00000587197 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
DNMT1-212ENST00000587197 MT1MQ8N339 61 aa6.06□□□□□ -1.44
DNMT1-212ENST00000587197 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
DNMT1-212ENST00000587197 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
DNMT1-212ENST00000587197 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
DNMT1-212ENST00000587197 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
DNMT1-212ENST00000587197 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
DNMT1-212ENST00000587197 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
DNMT1-212ENST00000587197 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
DNMT1-212ENST00000587197 MT4P47944 62 aa5.78□□□□□ -1.48
DNMT1-212ENST00000587197 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
DNMT1-212ENST00000587197 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
DNMT1-212ENST00000587197 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
DNMT1-212ENST00000587197 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
DNMT1-212ENST00000587197 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
DNMT1-212ENST00000587197 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
DNMT1-212ENST00000587197 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
DNMT1-212ENST00000587197 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
DNMT1-212ENST00000587197 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
DNMT1-212ENST00000587197 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
DNMT1-212ENST00000587197 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
DNMT1-212ENST00000587197 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
DNMT1-212ENST00000587197 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
DNMT1-212ENST00000587197 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
DNMT1-212ENST00000587197 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
DNMT1-212ENST00000587197 AHNAK2Q8IVF2 5795 aa5.36□□□□□ -1.55
DNMT1-212ENST00000587197 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
DNMT1-212ENST00000587197 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
DNMT1-212ENST00000587197 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
DNMT1-212ENST00000587197 MT1AP04731 61 aa5.26□□□□□ -1.57
DNMT1-212ENST00000587197 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
DNMT1-212ENST00000587197 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
DNMT1-212ENST00000587197 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
DNMT1-212ENST00000587197 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
DNMT1-212ENST00000587197 SVIPQ8NHG7 77 aa5□□□□□ -1.61
DNMT1-212ENST00000587197 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
DNMT1-212ENST00000587197 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
DNMT1-212ENST00000587197 MT3P25713 68 aa4.81□□□□□ -1.64
DNMT1-212ENST00000587197 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
DNMT1-212ENST00000587197 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.66
DNMT1-212ENST00000587197 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
DNMT1-212ENST00000587197 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
DNMT1-212ENST00000587197 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
DNMT1-212ENST00000587197 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
DNMT1-212ENST00000587197 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
DNMT1-212ENST00000587197 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
DNMT1-212ENST00000587197 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
DNMT1-212ENST00000587197 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
DNMT1-212ENST00000587197 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
DNMT1-212ENST00000587197 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
DNMT1-212ENST00000587197 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
DNMT1-212ENST00000587197 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
DNMT1-212ENST00000587197 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
DNMT1-212ENST00000587197 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
DNMT1-212ENST00000587197 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
DNMT1-212ENST00000587197 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
DNMT1-212ENST00000587197 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
DNMT1-212ENST00000587197 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
DNMT1-212ENST00000587197 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
DNMT1-212ENST00000587197 INE1O15225 51 aa3.31□□□□□ -1.88
DNMT1-212ENST00000587197 PRM1P04553 51 aa3.19□□□□□ -1.9
DNMT1-212ENST00000587197 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
DNMT1-212ENST00000587197 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
DNMT1-212ENST00000587197 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
DNMT1-212ENST00000587197 H3BS24 57 aa2.78□□□□□ -1.96
DNMT1-212ENST00000587197 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
DNMT1-212ENST00000587197 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms