RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 K7ERS5 55 aa5.76□□□□□ -1.49
VAT1-205ENST00000587173 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
VAT1-205ENST00000587173 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
VAT1-205ENST00000587173 MT1GP13640 62 aa5.71□□□□□ -1.5
VAT1-205ENST00000587173 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
VAT1-205ENST00000587173 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
VAT1-205ENST00000587173 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
VAT1-205ENST00000587173 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
VAT1-205ENST00000587173 MT4P47944 62 aa5.63□□□□□ -1.51
VAT1-205ENST00000587173 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
VAT1-205ENST00000587173 MT1MQ8N339 61 aa5.6□□□□□ -1.51
VAT1-205ENST00000587173 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
VAT1-205ENST00000587173 TNP1P09430 55 aa5.57□□□□□ -1.52
VAT1-205ENST00000587173 MT1LQ93083 61 aa5.57□□□□□ -1.52
VAT1-205ENST00000587173 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
VAT1-205ENST00000587173 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
VAT1-205ENST00000587173 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
VAT1-205ENST00000587173 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
VAT1-205ENST00000587173 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
VAT1-205ENST00000587173 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
VAT1-205ENST00000587173 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
VAT1-205ENST00000587173 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
VAT1-205ENST00000587173 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
VAT1-205ENST00000587173 ROMO1P60602 79 aa5.36□□□□□ -1.55
VAT1-205ENST00000587173 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
VAT1-205ENST00000587173 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
VAT1-205ENST00000587173 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
VAT1-205ENST00000587173 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
VAT1-205ENST00000587173 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
VAT1-205ENST00000587173 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
VAT1-205ENST00000587173 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
VAT1-205ENST00000587173 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
VAT1-205ENST00000587173 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
VAT1-205ENST00000587173 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
VAT1-205ENST00000587173 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
VAT1-205ENST00000587173 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
VAT1-205ENST00000587173 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
VAT1-205ENST00000587173 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
VAT1-205ENST00000587173 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
VAT1-205ENST00000587173 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
VAT1-205ENST00000587173 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
VAT1-205ENST00000587173 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
VAT1-205ENST00000587173 MT1AP04731 61 aa4.73□□□□□ -1.65
VAT1-205ENST00000587173 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
VAT1-205ENST00000587173 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
VAT1-205ENST00000587173 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
VAT1-205ENST00000587173 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
VAT1-205ENST00000587173 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
VAT1-205ENST00000587173 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
VAT1-205ENST00000587173 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
VAT1-205ENST00000587173 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
VAT1-205ENST00000587173 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
VAT1-205ENST00000587173 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
VAT1-205ENST00000587173 H3BS24 57 aa4.42□□□□□ -1.7
VAT1-205ENST00000587173 MT3P25713 68 aa4.37□□□□□ -1.71
VAT1-205ENST00000587173 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
VAT1-205ENST00000587173 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
VAT1-205ENST00000587173 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
VAT1-205ENST00000587173 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
VAT1-205ENST00000587173 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
VAT1-205ENST00000587173 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
VAT1-205ENST00000587173 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
VAT1-205ENST00000587173 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
VAT1-205ENST00000587173 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
VAT1-205ENST00000587173 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
VAT1-205ENST00000587173 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
VAT1-205ENST00000587173 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
VAT1-205ENST00000587173 INE1O15225 51 aa3.38□□□□□ -1.87
VAT1-205ENST00000587173 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
VAT1-205ENST00000587173 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
VAT1-205ENST00000587173 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
VAT1-205ENST00000587173 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
VAT1-205ENST00000587173 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
VAT1-205ENST00000587173 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
VAT1-205ENST00000587173 PRM1P04553 51 aa2.74□□□□□ -1.97
VAT1-205ENST00000587173 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
VAT1-205ENST00000587173 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 37.8 ms