RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
APOC1-201ENST00000586638 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
APOC1-201ENST00000586638 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
APOC1-201ENST00000586638 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
APOC1-201ENST00000586638 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
APOC1-201ENST00000586638 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
APOC1-201ENST00000586638 SPRR2DP22532 72 aa3.86□□□□□ -1.79
APOC1-201ENST00000586638 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
APOC1-201ENST00000586638 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
APOC1-201ENST00000586638 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
APOC1-201ENST00000586638 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
APOC1-201ENST00000586638 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
APOC1-201ENST00000586638 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
APOC1-201ENST00000586638 MT1EP04732 61 aa3.7□□□□□ -1.82
APOC1-201ENST00000586638 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
APOC1-201ENST00000586638 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
APOC1-201ENST00000586638 MT1LQ93083 61 aa3.63□□□□□ -1.83
APOC1-201ENST00000586638 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
APOC1-201ENST00000586638 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
APOC1-201ENST00000586638 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
APOC1-201ENST00000586638 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
APOC1-201ENST00000586638 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
APOC1-201ENST00000586638 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
APOC1-201ENST00000586638 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
APOC1-201ENST00000586638 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
APOC1-201ENST00000586638 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
APOC1-201ENST00000586638 MT1MQ8N339 61 aa3.49□□□□□ -1.85
APOC1-201ENST00000586638 MT1GP13640 62 aa3.47□□□□□ -1.85
APOC1-201ENST00000586638 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
APOC1-201ENST00000586638 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
APOC1-201ENST00000586638 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
APOC1-201ENST00000586638 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
APOC1-201ENST00000586638 MT4P47944 62 aa3.4□□□□□ -1.87
APOC1-201ENST00000586638 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
APOC1-201ENST00000586638 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
APOC1-201ENST00000586638 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
APOC1-201ENST00000586638 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
APOC1-201ENST00000586638 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
APOC1-201ENST00000586638 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
APOC1-201ENST00000586638 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
APOC1-201ENST00000586638 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
APOC1-201ENST00000586638 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
APOC1-201ENST00000586638 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
APOC1-201ENST00000586638 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
APOC1-201ENST00000586638 MT1AP04731 61 aa3.08□□□□□ -1.92
APOC1-201ENST00000586638 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
APOC1-201ENST00000586638 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
APOC1-201ENST00000586638 H3BS24 57 aa2.98□□□□□ -1.93
APOC1-201ENST00000586638 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
APOC1-201ENST00000586638 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
APOC1-201ENST00000586638 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
APOC1-201ENST00000586638 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
APOC1-201ENST00000586638 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
APOC1-201ENST00000586638 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
APOC1-201ENST00000586638 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
APOC1-201ENST00000586638 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
APOC1-201ENST00000586638 MT3P25713 68 aa2.76□□□□□ -1.97
APOC1-201ENST00000586638 INE1O15225 51 aa2.73□□□□□ -1.97
APOC1-201ENST00000586638 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
APOC1-201ENST00000586638 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
APOC1-201ENST00000586638 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
APOC1-201ENST00000586638 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
APOC1-201ENST00000586638 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
APOC1-201ENST00000586638 PRM1P04553 51 aa2.3□□□□□ -2.04
APOC1-201ENST00000586638 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
APOC1-201ENST00000586638 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
APOC1-201ENST00000586638 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
APOC1-201ENST00000586638 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
APOC1-201ENST00000586638 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
APOC1-201ENST00000586638 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
APOC1-201ENST00000586638 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
APOC1-201ENST00000586638 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
APOC1-201ENST00000586638 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
APOC1-201ENST00000586638 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
APOC1-201ENST00000586638 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
APOC1-201ENST00000586638 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
APOC1-201ENST00000586638 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 15.5 ms