RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 A0A1B0GU69 56 aa5.81□□□□□ -1.48
VAPA-209ENST00000585042 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
VAPA-209ENST00000585042 A0A0D9SG42 100 aa5.74□□□□□ -1.49
VAPA-209ENST00000585042 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
VAPA-209ENST00000585042 PSPHP1O15172 72 aa5.7□□□□□ -1.5
VAPA-209ENST00000585042 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
VAPA-209ENST00000585042 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.51
VAPA-209ENST00000585042 UQCR11O14957 56 aa5.63□□□□□ -1.51
VAPA-209ENST00000585042 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
VAPA-209ENST00000585042 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
VAPA-209ENST00000585042 MT1EP04732 61 aa5.6□□□□□ -1.51
VAPA-209ENST00000585042 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
VAPA-209ENST00000585042 GPR98Q8WXG9 6306 aa5.58□□□□□ -1.52
VAPA-209ENST00000585042 A6NED7 52 aa5.57□□□□□ -1.52
VAPA-209ENST00000585042 A8MU10 97 aa5.55□□□□□ -1.52
VAPA-209ENST00000585042 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
VAPA-209ENST00000585042 MT1GP13640 62 aa5.5□□□□□ -1.53
VAPA-209ENST00000585042 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
VAPA-209ENST00000585042 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
VAPA-209ENST00000585042 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
VAPA-209ENST00000585042 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
VAPA-209ENST00000585042 K7ERS5 55 aa5.37□□□□□ -1.55
VAPA-209ENST00000585042 TNP1P09430 55 aa5.37□□□□□ -1.55
VAPA-209ENST00000585042 MT1MQ8N339 61 aa5.34□□□□□ -1.55
VAPA-209ENST00000585042 MT4P47944 62 aa5.32□□□□□ -1.56
VAPA-209ENST00000585042 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
VAPA-209ENST00000585042 MT1LQ93083 61 aa5.31□□□□□ -1.56
VAPA-209ENST00000585042 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
VAPA-209ENST00000585042 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
VAPA-209ENST00000585042 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
VAPA-209ENST00000585042 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
VAPA-209ENST00000585042 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
VAPA-209ENST00000585042 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
VAPA-209ENST00000585042 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
VAPA-209ENST00000585042 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
VAPA-209ENST00000585042 MT3P25713 68 aa5.16□□□□□ -1.58
VAPA-209ENST00000585042 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
VAPA-209ENST00000585042 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
VAPA-209ENST00000585042 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
VAPA-209ENST00000585042 ROMO1P60602 79 aa5.07□□□□□ -1.6
VAPA-209ENST00000585042 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
VAPA-209ENST00000585042 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
VAPA-209ENST00000585042 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
VAPA-209ENST00000585042 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
VAPA-209ENST00000585042 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
VAPA-209ENST00000585042 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
VAPA-209ENST00000585042 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
VAPA-209ENST00000585042 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
VAPA-209ENST00000585042 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
VAPA-209ENST00000585042 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
VAPA-209ENST00000585042 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
VAPA-209ENST00000585042 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
VAPA-209ENST00000585042 MT1AP04731 61 aa4.53□□□□□ -1.68
VAPA-209ENST00000585042 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
VAPA-209ENST00000585042 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
VAPA-209ENST00000585042 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
VAPA-209ENST00000585042 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
VAPA-209ENST00000585042 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
VAPA-209ENST00000585042 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
VAPA-209ENST00000585042 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
VAPA-209ENST00000585042 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
VAPA-209ENST00000585042 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
VAPA-209ENST00000585042 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
VAPA-209ENST00000585042 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
VAPA-209ENST00000585042 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
VAPA-209ENST00000585042 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
VAPA-209ENST00000585042 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
VAPA-209ENST00000585042 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
VAPA-209ENST00000585042 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
VAPA-209ENST00000585042 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
VAPA-209ENST00000585042 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
VAPA-209ENST00000585042 INE1O15225 51 aa3.19□□□□□ -1.9
VAPA-209ENST00000585042 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
VAPA-209ENST00000585042 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
VAPA-209ENST00000585042 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
VAPA-209ENST00000585042 PRM1P04553 51 aa2.59□□□□□ -1.99
VAPA-209ENST00000585042 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
VAPA-209ENST00000585042 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 81.1 ms