RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 K7ERS5 55 aa4.42□□□□□ -1.7
CSNK1D-226ENST00000585026 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
CSNK1D-226ENST00000585026 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
CSNK1D-226ENST00000585026 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
CSNK1D-226ENST00000585026 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
CSNK1D-226ENST00000585026 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
CSNK1D-226ENST00000585026 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
CSNK1D-226ENST00000585026 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
CSNK1D-226ENST00000585026 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
CSNK1D-226ENST00000585026 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
CSNK1D-226ENST00000585026 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
CSNK1D-226ENST00000585026 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
CSNK1D-226ENST00000585026 ROMO1P60602 79 aa4.23□□□□□ -1.73
CSNK1D-226ENST00000585026 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
CSNK1D-226ENST00000585026 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
CSNK1D-226ENST00000585026 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
CSNK1D-226ENST00000585026 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
CSNK1D-226ENST00000585026 TNP1P09430 55 aa4.1□□□□□ -1.75
CSNK1D-226ENST00000585026 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CSNK1D-226ENST00000585026 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
CSNK1D-226ENST00000585026 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
CSNK1D-226ENST00000585026 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
CSNK1D-226ENST00000585026 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
CSNK1D-226ENST00000585026 MT1EP04732 61 aa3.99□□□□□ -1.77
CSNK1D-226ENST00000585026 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
CSNK1D-226ENST00000585026 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
CSNK1D-226ENST00000585026 MT1GP13640 62 aa3.93□□□□□ -1.78
CSNK1D-226ENST00000585026 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CSNK1D-226ENST00000585026 MT4P47944 62 aa3.92□□□□□ -1.78
CSNK1D-226ENST00000585026 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
CSNK1D-226ENST00000585026 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
CSNK1D-226ENST00000585026 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
CSNK1D-226ENST00000585026 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
CSNK1D-226ENST00000585026 MT1MQ8N339 61 aa3.82□□□□□ -1.8
CSNK1D-226ENST00000585026 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
CSNK1D-226ENST00000585026 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
CSNK1D-226ENST00000585026 MT1LQ93083 61 aa3.77□□□□□ -1.81
CSNK1D-226ENST00000585026 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
CSNK1D-226ENST00000585026 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
CSNK1D-226ENST00000585026 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
CSNK1D-226ENST00000585026 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
CSNK1D-226ENST00000585026 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
CSNK1D-226ENST00000585026 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
CSNK1D-226ENST00000585026 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
CSNK1D-226ENST00000585026 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
CSNK1D-226ENST00000585026 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
CSNK1D-226ENST00000585026 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
CSNK1D-226ENST00000585026 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
CSNK1D-226ENST00000585026 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CSNK1D-226ENST00000585026 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
CSNK1D-226ENST00000585026 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
CSNK1D-226ENST00000585026 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
CSNK1D-226ENST00000585026 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CSNK1D-226ENST00000585026 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
CSNK1D-226ENST00000585026 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
CSNK1D-226ENST00000585026 MT1AP04731 61 aa3.22□□□□□ -1.89
CSNK1D-226ENST00000585026 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
CSNK1D-226ENST00000585026 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
CSNK1D-226ENST00000585026 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
CSNK1D-226ENST00000585026 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
CSNK1D-226ENST00000585026 MT3P25713 68 aa3□□□□□ -1.93
CSNK1D-226ENST00000585026 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
CSNK1D-226ENST00000585026 INE1O15225 51 aa2.86□□□□□ -1.95
CSNK1D-226ENST00000585026 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
CSNK1D-226ENST00000585026 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
CSNK1D-226ENST00000585026 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
CSNK1D-226ENST00000585026 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
CSNK1D-226ENST00000585026 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CSNK1D-226ENST00000585026 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
CSNK1D-226ENST00000585026 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CSNK1D-226ENST00000585026 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
CSNK1D-226ENST00000585026 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CSNK1D-226ENST00000585026 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CSNK1D-226ENST00000585026 PRM1P04553 51 aa2.22□□□□□ -2.05
CSNK1D-226ENST00000585026 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
CSNK1D-226ENST00000585026 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CSNK1D-226ENST00000585026 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CSNK1D-226ENST00000585026 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms