RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
CCDC57-219ENST00000584717 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
CCDC57-219ENST00000584717 MT1EP04732 61 aa6.2□□□□□ -1.42
CCDC57-219ENST00000584717 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
CCDC57-219ENST00000584717 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
CCDC57-219ENST00000584717 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
CCDC57-219ENST00000584717 MT4P47944 62 aa6.03□□□□□ -1.44
CCDC57-219ENST00000584717 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
CCDC57-219ENST00000584717 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
CCDC57-219ENST00000584717 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
CCDC57-219ENST00000584717 MT1GP13640 62 aa6□□□□□ -1.45
CCDC57-219ENST00000584717 LCE4AQ5TA78 99 aa6□□□□□ -1.45
CCDC57-219ENST00000584717 ROMO1P60602 79 aa5.99□□□□□ -1.45
CCDC57-219ENST00000584717 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
CCDC57-219ENST00000584717 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
CCDC57-219ENST00000584717 TNP1P09430 55 aa5.94□□□□□ -1.46
CCDC57-219ENST00000584717 MT1MQ8N339 61 aa5.93□□□□□ -1.46
CCDC57-219ENST00000584717 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
CCDC57-219ENST00000584717 MT1LQ93083 61 aa5.87□□□□□ -1.47
CCDC57-219ENST00000584717 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
CCDC57-219ENST00000584717 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
CCDC57-219ENST00000584717 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
CCDC57-219ENST00000584717 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
CCDC57-219ENST00000584717 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CCDC57-219ENST00000584717 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
CCDC57-219ENST00000584717 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CCDC57-219ENST00000584717 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.5
CCDC57-219ENST00000584717 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
CCDC57-219ENST00000584717 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
CCDC57-219ENST00000584717 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
CCDC57-219ENST00000584717 KRTAP20-2Q3LI61 65 aa5.54□□□□□ -1.52
CCDC57-219ENST00000584717 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
CCDC57-219ENST00000584717 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
CCDC57-219ENST00000584717 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
CCDC57-219ENST00000584717 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
CCDC57-219ENST00000584717 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
CCDC57-219ENST00000584717 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
CCDC57-219ENST00000584717 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
CCDC57-219ENST00000584717 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
CCDC57-219ENST00000584717 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CCDC57-219ENST00000584717 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
CCDC57-219ENST00000584717 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
CCDC57-219ENST00000584717 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
CCDC57-219ENST00000584717 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
CCDC57-219ENST00000584717 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
CCDC57-219ENST00000584717 MT1AP04731 61 aa4.97□□□□□ -1.61
CCDC57-219ENST00000584717 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
CCDC57-219ENST00000584717 AHNAKQ09666 5890 aaKnown RBP4.96□□□□□ -1.62
CCDC57-219ENST00000584717 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
CCDC57-219ENST00000584717 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
CCDC57-219ENST00000584717 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
CCDC57-219ENST00000584717 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
CCDC57-219ENST00000584717 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
CCDC57-219ENST00000584717 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
CCDC57-219ENST00000584717 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
CCDC57-219ENST00000584717 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
CCDC57-219ENST00000584717 MT3P25713 68 aa4.56□□□□□ -1.68
CCDC57-219ENST00000584717 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
CCDC57-219ENST00000584717 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
CCDC57-219ENST00000584717 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
CCDC57-219ENST00000584717 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
CCDC57-219ENST00000584717 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
CCDC57-219ENST00000584717 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
CCDC57-219ENST00000584717 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
CCDC57-219ENST00000584717 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
CCDC57-219ENST00000584717 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CCDC57-219ENST00000584717 INE1O15225 51 aa3.67□□□□□ -1.82
CCDC57-219ENST00000584717 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
CCDC57-219ENST00000584717 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
CCDC57-219ENST00000584717 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CCDC57-219ENST00000584717 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
CCDC57-219ENST00000584717 H3BS24 57 aa3.42□□□□□ -1.86
CCDC57-219ENST00000584717 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
CCDC57-219ENST00000584717 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CCDC57-219ENST00000584717 PRM1P04553 51 aa3.07□□□□□ -1.92
CCDC57-219ENST00000584717 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CCDC57-219ENST00000584717 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
CCDC57-219ENST00000584717 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms