RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 DMDP11532 3685 aa-1.23□□□□□ -2.61
PPP4R1-227ENST00000583988 ABCC8Q09428 1581 aa-1.24□□□□□ -2.61
PPP4R1-227ENST00000583988 CMC2Q9NRP2 79 aa-1.24□□□□□ -2.61
PPP4R1-227ENST00000583988 UNC80Q8N2C7 3258 aa-1.25□□□□□ -2.61
PPP4R1-227ENST00000583988 TRPM2O94759 1503 aa-1.25□□□□□ -2.61
PPP4R1-227ENST00000583988 NRXN3Q9Y4C0 1643 aa-1.26□□□□□ -2.61
PPP4R1-227ENST00000583988 EP400Q96L91 3159 aa-1.26□□□□□ -2.61
PPP4R1-227ENST00000583988 CRYBG3Q68DQ2 2970 aa-1.26□□□□□ -2.61
PPP4R1-227ENST00000583988 CLTCL1P53675 1640 aa-1.27□□□□□ -2.61
PPP4R1-227ENST00000583988 IQGAP1P46940 1657 aa-1.28□□□□□ -2.61
PPP4R1-227ENST00000583988 FANCD2Q9BXW9 1451 aa-1.29□□□□□ -2.62
PPP4R1-227ENST00000583988 SZT2Q5T011 3432 aa-1.29□□□□□ -2.62
PPP4R1-227ENST00000583988 CEP350Q5VT06 3117 aa-1.3□□□□□ -2.62
PPP4R1-227ENST00000583988 WDFY4Q6ZS81 3184 aa-1.3□□□□□ -2.62
PPP4R1-227ENST00000583988 VCANP13611 3396 aa-1.3□□□□□ -2.62
PPP4R1-227ENST00000583988 ERICH3Q5RHP9 1530 aa-1.31□□□□□ -2.62
PPP4R1-227ENST00000583988 CFAP54Q96N23 3096 aa-1.31□□□□□ -2.62
PPP4R1-227ENST00000583988 RPS29P62273 56 aaKnown RBP-1.32□□□□□ -2.62
PPP4R1-227ENST00000583988 USP34Q70CQ2 3546 aa-1.32□□□□□ -2.62
PPP4R1-227ENST00000583988 MUC3AQ02505 3323 aa-1.34□□□□□ -2.62
PPP4R1-227ENST00000583988 NFAT5O94916 1531 aa-1.35□□□□□ -2.63
PPP4R1-227ENST00000583988 NDUFA1O15239 70 aa-1.36□□□□□ -2.63
PPP4R1-227ENST00000583988 WDFY3Q8IZQ1 3526 aa-1.36□□□□□ -2.63
PPP4R1-227ENST00000583988 MKI67P46013 3256 aaKnown RBP-1.37□□□□□ -2.63
PPP4R1-227ENST00000583988 VPS13CQ709C8 3753 aa-1.39□□□□□ -2.63
PPP4R1-227ENST00000583988 DNAH14Q0VDD8 3507 aa-1.39□□□□□ -2.63
PPP4R1-227ENST00000583988 CEP250Q9BV73 2442 aa-1.4□□□□□ -2.63
PPP4R1-227ENST00000583988 FRYLO94915 3013 aa-1.42□□□□□ -2.64
PPP4R1-227ENST00000583988 PCNTO95613 3336 aa-1.44□□□□□ -2.64
PPP4R1-227ENST00000583988 CDH23Q9H251 3354 aa-1.47□□□□□ -2.65
PPP4R1-227ENST00000583988 DNAH12Q6ZR08 3092 aa-1.48□□□□□ -2.65
PPP4R1-227ENST00000583988 SNRPGP15A8MWD9 76 aa-1.49□□□□□ -2.65
PPP4R1-227ENST00000583988 TOMM7Q9P0U1 55 aa-1.52□□□□□ -2.65
PPP4R1-227ENST00000583988 CFAP47Q6ZTR5 3102 aa-1.52□□□□□ -2.65
PPP4R1-227ENST00000583988 BRCA2P51587 3418 aa-1.54□□□□□ -2.66
PPP4R1-227ENST00000583988 KRTAP19-2Q3LHN2 52 aa-1.54□□□□□ -2.66
PPP4R1-227ENST00000583988 CENPFP49454 3210 aa-1.55□□□□□ -2.66
PPP4R1-227ENST00000583988 LINC01590Q5TEZ4 76 aa-1.56□□□□□ -2.66
PPP4R1-227ENST00000583988 RHPN1-AS1Q9BWJ2 59 aa-1.6□□□□□ -2.67
PPP4R1-227ENST00000583988 IQGAP2Q13576 1575 aa-1.6□□□□□ -2.67
PPP4R1-227ENST00000583988 TTTY10Q9BZA0 68 aa-1.61□□□□□ -2.67
PPP4R1-227ENST00000583988 ASPMQ8IZT6 3477 aa-1.61□□□□□ -2.67
PPP4R1-227ENST00000583988 SAMD9LQ8IVG5 1584 aa-1.62□□□□□ -2.67
PPP4R1-227ENST00000583988 UTRNP46939 3433 aa-1.63□□□□□ -2.67
PPP4R1-227ENST00000583988 DEFB104AQ8WTQ1 72 aa-1.65□□□□□ -2.67
PPP4R1-227ENST00000583988 VPS13AQ96RL7 3174 aa-1.67□□□□□ -2.68
PPP4R1-227ENST00000583988 DUOX1Q9NRD9 1551 aa-1.68□□□□□ -2.68
PPP4R1-227ENST00000583988 TOMM5Q8N4H5 51 aa-1.68□□□□□ -2.68
PPP4R1-227ENST00000583988 XIRP2A4UGR9 3374 aa-1.68□□□□□ -2.68
PPP4R1-227ENST00000583988 DEFB133Q30KQ1 61 aa-1.69□□□□□ -2.68
PPP4R1-227ENST00000583988 RPL39P62891 51 aaKnown RBP-1.7□□□□□ -2.68
PPP4R1-227ENST00000583988 ATP7AQ04656 1500 aa-1.71□□□□□ -2.68
PPP4R1-227ENST00000583988 GOLGB1Q14789 3259 aaKnown RBP-1.75□□□□□ -2.69
PPP4R1-227ENST00000583988 HTN1P15515 57 aa-1.76□□□□□ -2.69
PPP4R1-227ENST00000583988 A0A096LNI7 61 aa-1.77□□□□□ -2.69
PPP4R1-227ENST00000583988 TOP2AP11388 1531 aaKnown RBP-1.78□□□□□ -2.69
PPP4R1-227ENST00000583988 MROH2BQ7Z745 1585 aa-1.78□□□□□ -2.69
PPP4R1-227ENST00000583988 CD52P31358 61 aa-1.79□□□□□ -2.7
PPP4R1-227ENST00000583988 RPL39LQ96EH5 51 aaKnown RBP-1.79□□□□□ -2.7
PPP4R1-227ENST00000583988 DEFB124Q8NES8 71 aa-1.85□□□□□ -2.71
PPP4R1-227ENST00000583988 H3BUX3 64 aa-1.99□□□□□ -2.73
PPP4R1-227ENST00000583988 K7EIM0 57 aa-2.11□□□□□ -2.75
PPP4R1-227ENST00000583988 GCC2Q8IWJ2 1684 aa-2.14□□□□□ -2.75
PPP4R1-227ENST00000583988 LINC01556Q5JQF7 62 aa-2.14□□□□□ -2.75
PPP4R1-227ENST00000583988 SNRPGP62308 76 aaKnown RBP-2.18□□□□□ -2.76
PPP4R1-227ENST00000583988 ARHGAP5-AS1Q96IT6 56 aa-2.18□□□□□ -2.76
PPP4R1-227ENST00000583988 PRCDQ00LT1 54 aa-2.24□□□□□ -2.77
PPP4R1-227ENST00000583988 TMEM167AQ8TBQ9 72 aa-2.36□□□□□ -2.79
PPP4R1-227ENST00000583988 APELAP0DMC3 54 aa-2.39□□□□□ -2.79
PPP4R1-227ENST00000583988 HTN3P15516 51 aa-2.4□□□□□ -2.79
PPP4R1-227ENST00000583988 A0A096LPF7 62 aa-2.41□□□□□ -2.8
PPP4R1-227ENST00000583988 H3BSH0 61 aa-2.42□□□□□ -2.8
PPP4R1-227ENST00000583988 RPL39P5Q59GN2 51 aa-2.54□□□□□ -2.82
PPP4R1-227ENST00000583988 Q9Y3F1 56 aa-2.54□□□□□ -2.82
PPP4R1-227ENST00000583988 STATHP02808 62 aa-2.55□□□□□ -2.82
PPP4R1-227ENST00000583988 COX14Q96I36 57 aa-2.6□□□□□ -2.83
PPP4R1-227ENST00000583988 DEFB108AA8MXU0 73 aa-2.61□□□□□ -2.83
PPP4R1-227ENST00000583988 DEFB108BQ8NET1 73 aa-2.67□□□□□ -2.84
Retrieved 78 of 20,778 RNA–protein pairs in 105.1 ms