RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 KRTAP12-2P59991 146 aa4.84□□□□□ -1.63
NUP85-224ENST00000583948 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
NUP85-224ENST00000583948 MT1XP80297 61 aa4.77□□□□□ -1.65
NUP85-224ENST00000583948 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
NUP85-224ENST00000583948 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
NUP85-224ENST00000583948 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
NUP85-224ENST00000583948 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
NUP85-224ENST00000583948 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
NUP85-224ENST00000583948 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
NUP85-224ENST00000583948 ROMO1P60602 79 aa4.64□□□□□ -1.67
NUP85-224ENST00000583948 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
NUP85-224ENST00000583948 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NUP85-224ENST00000583948 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
NUP85-224ENST00000583948 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
NUP85-224ENST00000583948 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
NUP85-224ENST00000583948 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
NUP85-224ENST00000583948 MT4P47944 62 aa4.55□□□□□ -1.68
NUP85-224ENST00000583948 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
NUP85-224ENST00000583948 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
NUP85-224ENST00000583948 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
NUP85-224ENST00000583948 TNP1P09430 55 aa4.48□□□□□ -1.69
NUP85-224ENST00000583948 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
NUP85-224ENST00000583948 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
NUP85-224ENST00000583948 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
NUP85-224ENST00000583948 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
NUP85-224ENST00000583948 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
NUP85-224ENST00000583948 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
NUP85-224ENST00000583948 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
NUP85-224ENST00000583948 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
NUP85-224ENST00000583948 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
NUP85-224ENST00000583948 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
NUP85-224ENST00000583948 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
NUP85-224ENST00000583948 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
NUP85-224ENST00000583948 MT1EP04732 61 aa4.24□□□□□ -1.73
NUP85-224ENST00000583948 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
NUP85-224ENST00000583948 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
NUP85-224ENST00000583948 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
NUP85-224ENST00000583948 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
NUP85-224ENST00000583948 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
NUP85-224ENST00000583948 MT1MQ8N339 61 aa4.09□□□□□ -1.75
NUP85-224ENST00000583948 MT1GP13640 62 aa4.07□□□□□ -1.76
NUP85-224ENST00000583948 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
NUP85-224ENST00000583948 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
NUP85-224ENST00000583948 MT1LQ93083 61 aa3.96□□□□□ -1.78
NUP85-224ENST00000583948 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
NUP85-224ENST00000583948 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
NUP85-224ENST00000583948 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
NUP85-224ENST00000583948 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
NUP85-224ENST00000583948 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
NUP85-224ENST00000583948 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
NUP85-224ENST00000583948 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
NUP85-224ENST00000583948 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
NUP85-224ENST00000583948 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
NUP85-224ENST00000583948 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
NUP85-224ENST00000583948 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
NUP85-224ENST00000583948 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
NUP85-224ENST00000583948 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
NUP85-224ENST00000583948 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
NUP85-224ENST00000583948 MT3P25713 68 aa3.42□□□□□ -1.86
NUP85-224ENST00000583948 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
NUP85-224ENST00000583948 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
NUP85-224ENST00000583948 MT1AP04731 61 aa3.33□□□□□ -1.88
NUP85-224ENST00000583948 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
NUP85-224ENST00000583948 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
NUP85-224ENST00000583948 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
NUP85-224ENST00000583948 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
NUP85-224ENST00000583948 INE1O15225 51 aa2.89□□□□□ -1.95
NUP85-224ENST00000583948 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
NUP85-224ENST00000583948 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
NUP85-224ENST00000583948 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
NUP85-224ENST00000583948 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
NUP85-224ENST00000583948 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NUP85-224ENST00000583948 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
NUP85-224ENST00000583948 PRM1P04553 51 aa2.44□□□□□ -2.02
NUP85-224ENST00000583948 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
NUP85-224ENST00000583948 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
NUP85-224ENST00000583948 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
NUP85-224ENST00000583948 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 144.5 ms