RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 A6NED7 52 aa3.48□□□□□ -1.85
CDK5RAP3-229ENST00000583697 A8MU10 97 aa3.48□□□□□ -1.85
CDK5RAP3-229ENST00000583697 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
CDK5RAP3-229ENST00000583697 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
CDK5RAP3-229ENST00000583697 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
CDK5RAP3-229ENST00000583697 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
CDK5RAP3-229ENST00000583697 K7ERS5 55 aa3.43□□□□□ -1.86
CDK5RAP3-229ENST00000583697 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
CDK5RAP3-229ENST00000583697 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
CDK5RAP3-229ENST00000583697 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
CDK5RAP3-229ENST00000583697 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
CDK5RAP3-229ENST00000583697 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
CDK5RAP3-229ENST00000583697 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
CDK5RAP3-229ENST00000583697 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
CDK5RAP3-229ENST00000583697 MT1EP04732 61 aa3.25□□□□□ -1.89
CDK5RAP3-229ENST00000583697 TNP1P09430 55 aa3.25□□□□□ -1.89
CDK5RAP3-229ENST00000583697 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
CDK5RAP3-229ENST00000583697 ROMO1P60602 79 aa3.2□□□□□ -1.9
CDK5RAP3-229ENST00000583697 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
CDK5RAP3-229ENST00000583697 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
CDK5RAP3-229ENST00000583697 MT1GP13640 62 aa3.16□□□□□ -1.9
CDK5RAP3-229ENST00000583697 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CDK5RAP3-229ENST00000583697 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
CDK5RAP3-229ENST00000583697 MT4P47944 62 aa3.11□□□□□ -1.91
CDK5RAP3-229ENST00000583697 MT1MQ8N339 61 aa3.11□□□□□ -1.91
CDK5RAP3-229ENST00000583697 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
CDK5RAP3-229ENST00000583697 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CDK5RAP3-229ENST00000583697 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
CDK5RAP3-229ENST00000583697 MT1LQ93083 61 aa3.08□□□□□ -1.92
CDK5RAP3-229ENST00000583697 KRTAP23-1A1A580 65 aa3.07□□□□□ -1.92
CDK5RAP3-229ENST00000583697 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
CDK5RAP3-229ENST00000583697 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
CDK5RAP3-229ENST00000583697 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
CDK5RAP3-229ENST00000583697 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
CDK5RAP3-229ENST00000583697 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
CDK5RAP3-229ENST00000583697 SVIPQ8NHG7 77 aa2.96□□□□□ -1.94
CDK5RAP3-229ENST00000583697 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
CDK5RAP3-229ENST00000583697 PRAC1Q96KF2 57 aa2.9□□□□□ -1.95
CDK5RAP3-229ENST00000583697 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
CDK5RAP3-229ENST00000583697 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
CDK5RAP3-229ENST00000583697 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
CDK5RAP3-229ENST00000583697 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
CDK5RAP3-229ENST00000583697 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
CDK5RAP3-229ENST00000583697 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CDK5RAP3-229ENST00000583697 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
CDK5RAP3-229ENST00000583697 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
CDK5RAP3-229ENST00000583697 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CDK5RAP3-229ENST00000583697 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
CDK5RAP3-229ENST00000583697 MT1AP04731 61 aa2.63□□□□□ -1.99
CDK5RAP3-229ENST00000583697 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
CDK5RAP3-229ENST00000583697 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
CDK5RAP3-229ENST00000583697 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
CDK5RAP3-229ENST00000583697 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
CDK5RAP3-229ENST00000583697 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CDK5RAP3-229ENST00000583697 MUC5ACP98088 5654 aa2.53□□□□□ -2
CDK5RAP3-229ENST00000583697 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
CDK5RAP3-229ENST00000583697 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
CDK5RAP3-229ENST00000583697 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
CDK5RAP3-229ENST00000583697 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
CDK5RAP3-229ENST00000583697 H3BS24 57 aa2.47□□□□□ -2.01
CDK5RAP3-229ENST00000583697 MT3P25713 68 aa2.42□□□□□ -2.02
CDK5RAP3-229ENST00000583697 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
CDK5RAP3-229ENST00000583697 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
CDK5RAP3-229ENST00000583697 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
CDK5RAP3-229ENST00000583697 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
CDK5RAP3-229ENST00000583697 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
CDK5RAP3-229ENST00000583697 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CDK5RAP3-229ENST00000583697 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
CDK5RAP3-229ENST00000583697 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
CDK5RAP3-229ENST00000583697 A0A0A0MQY5 61 aa1.96□□□□□ -2.1
CDK5RAP3-229ENST00000583697 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
CDK5RAP3-229ENST00000583697 INE1O15225 51 aa1.85□□□□□ -2.11
CDK5RAP3-229ENST00000583697 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CDK5RAP3-229ENST00000583697 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
CDK5RAP3-229ENST00000583697 PRM1P04553 51 aa1.64□□□□□ -2.15
CDK5RAP3-229ENST00000583697 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
CDK5RAP3-229ENST00000583697 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
CDK5RAP3-229ENST00000583697 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 25 ms