RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
CDK5RAP3-228ENST00000583363 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
CDK5RAP3-228ENST00000583363 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
CDK5RAP3-228ENST00000583363 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
CDK5RAP3-228ENST00000583363 SPRR2DP22532 72 aa6.17□□□□□ -1.42
CDK5RAP3-228ENST00000583363 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
CDK5RAP3-228ENST00000583363 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
CDK5RAP3-228ENST00000583363 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
CDK5RAP3-228ENST00000583363 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
CDK5RAP3-228ENST00000583363 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
CDK5RAP3-228ENST00000583363 MT1EP04732 61 aa6.01□□□□□ -1.45
CDK5RAP3-228ENST00000583363 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
CDK5RAP3-228ENST00000583363 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
CDK5RAP3-228ENST00000583363 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
CDK5RAP3-228ENST00000583363 MT1LQ93083 61 aa5.84□□□□□ -1.47
CDK5RAP3-228ENST00000583363 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
CDK5RAP3-228ENST00000583363 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CDK5RAP3-228ENST00000583363 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
CDK5RAP3-228ENST00000583363 MT1GP13640 62 aa5.77□□□□□ -1.49
CDK5RAP3-228ENST00000583363 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
CDK5RAP3-228ENST00000583363 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
CDK5RAP3-228ENST00000583363 MT1MQ8N339 61 aa5.67□□□□□ -1.5
CDK5RAP3-228ENST00000583363 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
CDK5RAP3-228ENST00000583363 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
CDK5RAP3-228ENST00000583363 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
CDK5RAP3-228ENST00000583363 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
CDK5RAP3-228ENST00000583363 HMCN1Q96RW7 5635 aa5.48□□□□□ -1.53
CDK5RAP3-228ENST00000583363 AHNAK2Q8IVF2 5795 aa5.44□□□□□ -1.54
CDK5RAP3-228ENST00000583363 MT4P47944 62 aa5.44□□□□□ -1.54
CDK5RAP3-228ENST00000583363 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
CDK5RAP3-228ENST00000583363 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
CDK5RAP3-228ENST00000583363 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
CDK5RAP3-228ENST00000583363 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
CDK5RAP3-228ENST00000583363 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
CDK5RAP3-228ENST00000583363 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
CDK5RAP3-228ENST00000583363 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
CDK5RAP3-228ENST00000583363 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
CDK5RAP3-228ENST00000583363 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
CDK5RAP3-228ENST00000583363 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
CDK5RAP3-228ENST00000583363 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
CDK5RAP3-228ENST00000583363 MT1AP04731 61 aa4.97□□□□□ -1.61
CDK5RAP3-228ENST00000583363 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
CDK5RAP3-228ENST00000583363 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
CDK5RAP3-228ENST00000583363 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
CDK5RAP3-228ENST00000583363 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
CDK5RAP3-228ENST00000583363 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
CDK5RAP3-228ENST00000583363 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
CDK5RAP3-228ENST00000583363 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
CDK5RAP3-228ENST00000583363 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
CDK5RAP3-228ENST00000583363 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CDK5RAP3-228ENST00000583363 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
CDK5RAP3-228ENST00000583363 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
CDK5RAP3-228ENST00000583363 MT3P25713 68 aa4.53□□□□□ -1.68
CDK5RAP3-228ENST00000583363 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
CDK5RAP3-228ENST00000583363 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
CDK5RAP3-228ENST00000583363 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
CDK5RAP3-228ENST00000583363 H3BS24 57 aa4.34□□□□□ -1.71
CDK5RAP3-228ENST00000583363 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
CDK5RAP3-228ENST00000583363 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CDK5RAP3-228ENST00000583363 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CDK5RAP3-228ENST00000583363 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
CDK5RAP3-228ENST00000583363 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CDK5RAP3-228ENST00000583363 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CDK5RAP3-228ENST00000583363 INE1O15225 51 aa3.94□□□□□ -1.78
CDK5RAP3-228ENST00000583363 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
CDK5RAP3-228ENST00000583363 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
CDK5RAP3-228ENST00000583363 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
CDK5RAP3-228ENST00000583363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
CDK5RAP3-228ENST00000583363 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CDK5RAP3-228ENST00000583363 PRM1P04553 51 aa3.32□□□□□ -1.88
CDK5RAP3-228ENST00000583363 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
CDK5RAP3-228ENST00000583363 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
CDK5RAP3-228ENST00000583363 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CDK5RAP3-228ENST00000583363 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
CDK5RAP3-228ENST00000583363 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CDK5RAP3-228ENST00000583363 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CDK5RAP3-228ENST00000583363 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
CDK5RAP3-228ENST00000583363 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 50.7 ms