RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 ROMO1P60602 79 aa8.82□□□□□ -1
MIR3960-201ENST00000583311 MT1GP13640 62 aa8.77□□□□□ -1.01
MIR3960-201ENST00000583311 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
MIR3960-201ENST00000583311 KRTAP23-1A1A580 65 aa8.76□□□□□ -1.01
MIR3960-201ENST00000583311 LCE3BQ5TA77 95 aa8.74□□□□□ -1.01
MIR3960-201ENST00000583311 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
MIR3960-201ENST00000583311 MT1LQ93083 61 aa8.73□□□□□ -1.01
MIR3960-201ENST00000583311 KRTAP2-2Q9BYT5 123 aa8.73□□□□□ -1.01
MIR3960-201ENST00000583311 KRTAP2-1Q9BYU5 128 aa8.73□□□□□ -1.01
MIR3960-201ENST00000583311 MT1MQ8N339 61 aa8.59□□□□□ -1.03
MIR3960-201ENST00000583311 BRK1Q8WUW1 75 aa8.58□□□□□ -1.04
MIR3960-201ENST00000583311 DSTQ03001 7570 aaKnown RBP8.51□□□□□ -1.05
MIR3960-201ENST00000583311 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
MIR3960-201ENST00000583311 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
MIR3960-201ENST00000583311 KRTAP4-3Q9BYR4 195 aa8.32□□□□□ -1.08
MIR3960-201ENST00000583311 KRTAP4-7Q9BYR0 210 aa8.27□□□□□ -1.09
MIR3960-201ENST00000583311 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
MIR3960-201ENST00000583311 LCE3CQ5T5A8 94 aa8.11□□□□□ -1.11
MIR3960-201ENST00000583311 LCE4AQ5TA78 99 aa8.03□□□□□ -1.12
MIR3960-201ENST00000583311 KRTAP4-9Q9BYQ8 210 aa7.96□□□□□ -1.14
MIR3960-201ENST00000583311 KRTAP5-4Q6L8H1 288 aa7.92□□□□□ -1.14
MIR3960-201ENST00000583311 PRO0628Q9UI54 55 aa7.88□□□□□ -1.15
MIR3960-201ENST00000583311 LCE1DQ5T752 114 aa7.85□□□□□ -1.15
MIR3960-201ENST00000583311 MT4P47944 62 aa7.83□□□□□ -1.16
MIR3960-201ENST00000583311 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
MIR3960-201ENST00000583311 KRTAP5-5Q701N2 237 aaPredicted RBP7.82□□□□□ -1.16
MIR3960-201ENST00000583311 HMCN1Q96RW7 5635 aa7.69□□□□□ -1.18
MIR3960-201ENST00000583311 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
MIR3960-201ENST00000583311 KRTAP4-6Q9BYQ5 205 aa7.62□□□□□ -1.19
MIR3960-201ENST00000583311 KRTAP12-4P60329 112 aa7.58□□□□□ -1.2
MIR3960-201ENST00000583311 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
MIR3960-201ENST00000583311 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
MIR3960-201ENST00000583311 MT1AP04731 61 aa7.45□□□□□ -1.22
MIR3960-201ENST00000583311 KRTAP20-2Q3LI61 65 aa7.45□□□□□ -1.22
MIR3960-201ENST00000583311 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
MIR3960-201ENST00000583311 SYNE1Q8NF91 8797 aaKnown RBP7.45□□□□□ -1.22
MIR3960-201ENST00000583311 KRTAP6-1Q3LI64 71 aa7.35□□□□□ -1.23
MIR3960-201ENST00000583311 GPR98Q8WXG9 6306 aa7.3□□□□□ -1.24
MIR3960-201ENST00000583311 AHNAK2Q8IVF2 5795 aa7.21□□□□□ -1.26
MIR3960-201ENST00000583311 KRTAP5-3Q6L8H2 238 aa7.19□□□□□ -1.26
MIR3960-201ENST00000583311 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
MIR3960-201ENST00000583311 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
MIR3960-201ENST00000583311 KRTAP5-10Q6L8G5 202 aa7.05□□□□□ -1.28
MIR3960-201ENST00000583311 KRTAP5-2Q701N4 177 aa7.02□□□□□ -1.29
MIR3960-201ENST00000583311 KRTAP6-2Q3LI66 62 aa6.94□□□□□ -1.3
MIR3960-201ENST00000583311 MT3P25713 68 aa6.83□□□□□ -1.32
MIR3960-201ENST00000583311 KRTAP5-7Q6L8G8 165 aa6.73□□□□□ -1.33
MIR3960-201ENST00000583311 KRTAP4-11Q9BYQ6 195 aa6.7□□□□□ -1.34
MIR3960-201ENST00000583311 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
MIR3960-201ENST00000583311 OBSCNQ5VST9 7968 aa6.5□□□□□ -1.37
MIR3960-201ENST00000583311 KRTAP5-8O75690 187 aa6.43□□□□□ -1.38
MIR3960-201ENST00000583311 KRTAP5-1Q6L8H4 278 aa6.19□□□□□ -1.42
MIR3960-201ENST00000583311 LCE1EQ5T753 118 aa6.16□□□□□ -1.42
MIR3960-201ENST00000583311 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
MIR3960-201ENST00000583311 MUC5ACP98088 5654 aa6.04□□□□□ -1.44
MIR3960-201ENST00000583311 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.46
MIR3960-201ENST00000583311 MUC5BQ9HC84 5762 aaPredicted RBP5.88□□□□□ -1.47
MIR3960-201ENST00000583311 AHNAKQ09666 5890 aaKnown RBP5.78□□□□□ -1.48
MIR3960-201ENST00000583311 LCE1BQ5T7P3 118 aa5.74□□□□□ -1.49
MIR3960-201ENST00000583311 LCE1CQ5T751 118 aa5.71□□□□□ -1.5
MIR3960-201ENST00000583311 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
MIR3960-201ENST00000583311 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
MIR3960-201ENST00000583311 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
MIR3960-201ENST00000583311 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.24□□□□□ -1.57
MIR3960-201ENST00000583311 KRTAP5-11Q6L8G4 156 aa5.12□□□□□ -1.59
MIR3960-201ENST00000583311 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
MIR3960-201ENST00000583311 LCE1FQ5T754 118 aa4.9□□□□□ -1.63
MIR3960-201ENST00000583311 KRTAP21-2Q3LI59 83 aa4.83□□□□□ -1.64
MIR3960-201ENST00000583311 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
MIR3960-201ENST00000583311 INE1O15225 51 aa4.62□□□□□ -1.67
MIR3960-201ENST00000583311 PRM1P04553 51 aa4.51□□□□□ -1.69
MIR3960-201ENST00000583311 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
MIR3960-201ENST00000583311 KRTAP4-4Q9BYR3 166 aa4.33□□□□□ -1.72
MIR3960-201ENST00000583311 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
MIR3960-201ENST00000583311 H3BS24 57 aa3.18□□□□□ -1.9
MIR3960-201ENST00000583311 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
MIR3960-201ENST00000583311 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms