RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 AGLP35573 1532 aa-2.57□□□□□ -2.82
SMARCE1-219ENST00000583294 SCRIBQ14160 1630 aa-2.59□□□□□ -2.82
SMARCE1-219ENST00000583294 CCDC180Q9P1Z9 1646 aa-2.59□□□□□ -2.82
SMARCE1-219ENST00000583294 TTTY10Q9BZA0 68 aa-2.59□□□□□ -2.82
SMARCE1-219ENST00000583294 TRPM2O94759 1503 aa-2.6□□□□□ -2.83
SMARCE1-219ENST00000583294 CPS1P31327 1500 aa-2.61□□□□□ -2.83
SMARCE1-219ENST00000583294 EFCAB5A4FU69 1503 aa-2.62□□□□□ -2.83
SMARCE1-219ENST00000583294 A0A087WWC5 75 aa-2.63□□□□□ -2.83
SMARCE1-219ENST00000583294 NRXN3Q9Y4C0 1643 aa-2.64□□□□□ -2.83
SMARCE1-219ENST00000583294 DNAH14Q0VDD8 3507 aa-2.65□□□□□ -2.83
SMARCE1-219ENST00000583294 ABCA10Q8WWZ4 1543 aa-2.65□□□□□ -2.83
SMARCE1-219ENST00000583294 ABCA5Q8WWZ7 1642 aa-2.66□□□□□ -2.84
SMARCE1-219ENST00000583294 MKI67P46013 3256 aaKnown RBP-2.69□□□□□ -2.84
SMARCE1-219ENST00000583294 DEFB133Q30KQ1 61 aa-2.7□□□□□ -2.84
SMARCE1-219ENST00000583294 RHPN1-AS1Q9BWJ2 59 aa-2.7□□□□□ -2.84
SMARCE1-219ENST00000583294 LINC01590Q5TEZ4 76 aa-2.71□□□□□ -2.84
SMARCE1-219ENST00000583294 PRXQ9BXM0 1461 aa-2.71□□□□□ -2.84
SMARCE1-219ENST00000583294 NDUFA1O15239 70 aa-2.73□□□□□ -2.85
SMARCE1-219ENST00000583294 CLTCL1P53675 1640 aa-2.73□□□□□ -2.85
SMARCE1-219ENST00000583294 SMIM5Q71RC9 77 aa-2.74□□□□□ -2.85
SMARCE1-219ENST00000583294 USP34Q70CQ2 3546 aa-2.74□□□□□ -2.85
SMARCE1-219ENST00000583294 XIRP2A4UGR9 3374 aa-2.74□□□□□ -2.85
SMARCE1-219ENST00000583294 DNAH12Q6ZR08 3092 aa-2.74□□□□□ -2.85
SMARCE1-219ENST00000583294 CFAP47Q6ZTR5 3102 aa-2.77□□□□□ -2.85
SMARCE1-219ENST00000583294 KRTAP19-2Q3LHN2 52 aa-2.77□□□□□ -2.85
SMARCE1-219ENST00000583294 TOMM7Q9P0U1 55 aa-2.77□□□□□ -2.85
SMARCE1-219ENST00000583294 NFAT5O94916 1531 aa-2.78□□□□□ -2.85
SMARCE1-219ENST00000583294 CMC2Q9NRP2 79 aa-2.78□□□□□ -2.85
SMARCE1-219ENST00000583294 LOC400499M0QZD8 3231 aa-2.79□□□□□ -2.86
SMARCE1-219ENST00000583294 UNC80Q8N2C7 3258 aa-2.79□□□□□ -2.86
SMARCE1-219ENST00000583294 CD52P31358 61 aa-2.79□□□□□ -2.86
SMARCE1-219ENST00000583294 ADCY10Q96PN6 1610 aa-2.8□□□□□ -2.86
SMARCE1-219ENST00000583294 IQGAP1P46940 1657 aa-2.82□□□□□ -2.86
SMARCE1-219ENST00000583294 FANCD2Q9BXW9 1451 aa-2.83□□□□□ -2.86
SMARCE1-219ENST00000583294 DDX60Q8IY21 1712 aaKnown RBP-2.84□□□□□ -2.86
SMARCE1-219ENST00000583294 HTN1P15515 57 aa-2.84□□□□□ -2.86
SMARCE1-219ENST00000583294 ABCC8Q09428 1581 aa-2.84□□□□□ -2.86
SMARCE1-219ENST00000583294 A0A096LNI7 61 aa-2.86□□□□□ -2.87
SMARCE1-219ENST00000583294 ASPMQ8IZT6 3477 aa-2.9□□□□□ -2.87
SMARCE1-219ENST00000583294 DEFB124Q8NES8 71 aa-2.92□□□□□ -2.88
SMARCE1-219ENST00000583294 BRCA2P51587 3418 aa-2.93□□□□□ -2.88
SMARCE1-219ENST00000583294 VCANP13611 3396 aa-2.98□□□□□ -2.89
SMARCE1-219ENST00000583294 DUOX1Q9NRD9 1551 aa-3□□□□□ -2.89
SMARCE1-219ENST00000583294 CENPFP49454 3210 aa-3□□□□□ -2.89
SMARCE1-219ENST00000583294 SAMD9LQ8IVG5 1584 aa-3.01□□□□□ -2.89
SMARCE1-219ENST00000583294 CDH23Q9H251 3354 aa-3.04□□□□□ -2.9
SMARCE1-219ENST00000583294 RPL39P62891 51 aaKnown RBP-3.05□□□□□ -2.9
SMARCE1-219ENST00000583294 ERICH3Q5RHP9 1530 aa-3.08□□□□□ -2.9
SMARCE1-219ENST00000583294 TOP2AP11388 1531 aaKnown RBP-3.1□□□□□ -2.91
SMARCE1-219ENST00000583294 VPS13AQ96RL7 3174 aa-3.14□□□□□ -2.91
SMARCE1-219ENST00000583294 SMIM31A0A1B0GVY4 71 aa-3.14□□□□□ -2.91
SMARCE1-219ENST00000583294 RPL39LQ96EH5 51 aaKnown RBP-3.16□□□□□ -2.92
SMARCE1-219ENST00000583294 LINC01556Q5JQF7 62 aa-3.19□□□□□ -2.92
SMARCE1-219ENST00000583294 H3BUX3 64 aa-3.2□□□□□ -2.92
SMARCE1-219ENST00000583294 SNRPGP15A8MWD9 76 aa-3.21□□□□□ -2.92
SMARCE1-219ENST00000583294 ATP7AQ04656 1500 aa-3.24□□□□□ -2.93
SMARCE1-219ENST00000583294 DEFB104AQ8WTQ1 72 aa-3.26□□□□□ -2.93
SMARCE1-219ENST00000583294 MROH2BQ7Z745 1585 aa-3.28□□□□□ -2.93
SMARCE1-219ENST00000583294 IQGAP2Q13576 1575 aa-3.42□□□□□ -2.96
SMARCE1-219ENST00000583294 K7EIM0 57 aa-3.42□□□□□ -2.96
SMARCE1-219ENST00000583294 TOMM5Q8N4H5 51 aa-3.42□□□□□ -2.96
SMARCE1-219ENST00000583294 UTRNP46939 3433 aa-3.42□□□□□ -2.96
SMARCE1-219ENST00000583294 APELAP0DMC3 54 aa-3.56□□□□□ -2.98
SMARCE1-219ENST00000583294 A0A096LPF7 62 aa-3.57□□□□□ -2.98
SMARCE1-219ENST00000583294 ARHGAP5-AS1Q96IT6 56 aa-3.57□□□□□ -2.98
SMARCE1-219ENST00000583294 PRCDQ00LT1 54 aa-3.62□□□□□ -2.99
SMARCE1-219ENST00000583294 TMEM167AQ8TBQ9 72 aa-3.67□□□□□ -3
SMARCE1-219ENST00000583294 HTN3P15516 51 aa-3.77□□□□□ -3.01
SMARCE1-219ENST00000583294 Q9Y3F1 56 aa-3.82□□□□□ -3.02
SMARCE1-219ENST00000583294 SNRPGP62308 76 aaKnown RBP-3.86□□□□□ -3.03
SMARCE1-219ENST00000583294 GOLGB1Q14789 3259 aaKnown RBP-3.87□□□□□ -3.03
SMARCE1-219ENST00000583294 RPL39P5Q59GN2 51 aa-3.95□□□□□ -3.04
SMARCE1-219ENST00000583294 GCC2Q8IWJ2 1684 aa-3.99□□□□□ -3.05
SMARCE1-219ENST00000583294 DEFB108AA8MXU0 73 aa-4.02□□□□□ -3.05
SMARCE1-219ENST00000583294 H3BSH0 61 aa-4.08□□□□□ -3.06
SMARCE1-219ENST00000583294 COX14Q96I36 57 aa-4.11□□□□□ -3.07
SMARCE1-219ENST00000583294 DEFB108BQ8NET1 73 aa-4.34□□□□□ -3.1
SMARCE1-219ENST00000583294 STATHP02808 62 aa-4.81□□□□□ -3.18
Retrieved 78 of 20,778 RNA–protein pairs in 184 ms