RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 COX7CP15954 63 aa2.62□□□□□ -1.99
CTC1-211ENST00000583254 COA5Q86WW8 74 aa2.61□□□□□ -1.99
CTC1-211ENST00000583254 SERP1Q9Y6X1 66 aa2.61□□□□□ -1.99
CTC1-211ENST00000583254 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CTC1-211ENST00000583254 H7BZZ5 65 aa2.56□□□□□ -2
CTC1-211ENST00000583254 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
CTC1-211ENST00000583254 MT1GP13640 62 aa2.55□□□□□ -2
CTC1-211ENST00000583254 CAMK2N1Q7Z7J9 78 aa2.55□□□□□ -2
CTC1-211ENST00000583254 PP632Q6XCG6 107 aa2.54□□□□□ -2
CTC1-211ENST00000583254 MT1MQ8N339 61 aa2.54□□□□□ -2
CTC1-211ENST00000583254 A0A0D9SG42 100 aa2.53□□□□□ -2
CTC1-211ENST00000583254 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
CTC1-211ENST00000583254 A0A1B0GU33 70 aa2.52□□□□□ -2.01
CTC1-211ENST00000583254 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
CTC1-211ENST00000583254 SPATA8Q6RVD6 105 aa2.51□□□□□ -2.01
CTC1-211ENST00000583254 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
CTC1-211ENST00000583254 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
CTC1-211ENST00000583254 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CTC1-211ENST00000583254 A0A1B0GU69 56 aa2.5□□□□□ -2.01
CTC1-211ENST00000583254 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
CTC1-211ENST00000583254 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
CTC1-211ENST00000583254 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
CTC1-211ENST00000583254 K7ERS5 55 aa2.46□□□□□ -2.02
CTC1-211ENST00000583254 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
CTC1-211ENST00000583254 A6NED7 52 aa2.45□□□□□ -2.02
CTC1-211ENST00000583254 MT1LQ93083 61 aa2.45□□□□□ -2.02
CTC1-211ENST00000583254 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
CTC1-211ENST00000583254 A8MU10 97 aa2.43□□□□□ -2.02
CTC1-211ENST00000583254 Q1T7F1 81 aa2.43□□□□□ -2.02
CTC1-211ENST00000583254 ROMO1P60602 79 aa2.41□□□□□ -2.02
CTC1-211ENST00000583254 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
CTC1-211ENST00000583254 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
CTC1-211ENST00000583254 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
CTC1-211ENST00000583254 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
CTC1-211ENST00000583254 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
CTC1-211ENST00000583254 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
CTC1-211ENST00000583254 UQCR11O14957 56 aa2.35□□□□□ -2.03
CTC1-211ENST00000583254 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
CTC1-211ENST00000583254 TNP1P09430 55 aa2.34□□□□□ -2.03
CTC1-211ENST00000583254 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
CTC1-211ENST00000583254 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
CTC1-211ENST00000583254 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
CTC1-211ENST00000583254 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
CTC1-211ENST00000583254 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
CTC1-211ENST00000583254 NDUFAF8A1L188 74 aa2.25□□□□□ -2.05
CTC1-211ENST00000583254 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
CTC1-211ENST00000583254 LOC100996750A0A140TA64 210 aa2.23□□□□□ -2.05
CTC1-211ENST00000583254 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
CTC1-211ENST00000583254 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
CTC1-211ENST00000583254 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
CTC1-211ENST00000583254 KRTAP15-1Q3LI76 137 aa2.19□□□□□ -2.06
CTC1-211ENST00000583254 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
CTC1-211ENST00000583254 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.07
CTC1-211ENST00000583254 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
CTC1-211ENST00000583254 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
CTC1-211ENST00000583254 MT1AP04731 61 aa2.07□□□□□ -2.08
CTC1-211ENST00000583254 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
CTC1-211ENST00000583254 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
CTC1-211ENST00000583254 INE1O15225 51 aa1.93□□□□□ -2.1
CTC1-211ENST00000583254 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
CTC1-211ENST00000583254 MT3P25713 68 aa1.9□□□□□ -2.11
CTC1-211ENST00000583254 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
CTC1-211ENST00000583254 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
CTC1-211ENST00000583254 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
CTC1-211ENST00000583254 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
CTC1-211ENST00000583254 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
CTC1-211ENST00000583254 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
CTC1-211ENST00000583254 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
CTC1-211ENST00000583254 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
CTC1-211ENST00000583254 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
CTC1-211ENST00000583254 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
CTC1-211ENST00000583254 LCE3EQ5T5B0 92 aa1.47□□□□□ -2.17
CTC1-211ENST00000583254 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
CTC1-211ENST00000583254 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CTC1-211ENST00000583254 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
CTC1-211ENST00000583254 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CTC1-211ENST00000583254 PRM1P04553 51 aa1.08□□□□□ -2.24
CTC1-211ENST00000583254 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms