RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
PDLIM1P3-201ENST00000582370 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
PDLIM1P3-201ENST00000582370 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
PDLIM1P3-201ENST00000582370 ROMO1P60602 79 aa3.49□□□□□ -1.85
PDLIM1P3-201ENST00000582370 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
PDLIM1P3-201ENST00000582370 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
PDLIM1P3-201ENST00000582370 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
PDLIM1P3-201ENST00000582370 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
PDLIM1P3-201ENST00000582370 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
PDLIM1P3-201ENST00000582370 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
PDLIM1P3-201ENST00000582370 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
PDLIM1P3-201ENST00000582370 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
PDLIM1P3-201ENST00000582370 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P3-201ENST00000582370 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
PDLIM1P3-201ENST00000582370 MT4P47944 62 aa3.31□□□□□ -1.88
PDLIM1P3-201ENST00000582370 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
PDLIM1P3-201ENST00000582370 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
PDLIM1P3-201ENST00000582370 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
PDLIM1P3-201ENST00000582370 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
PDLIM1P3-201ENST00000582370 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
PDLIM1P3-201ENST00000582370 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PDLIM1P3-201ENST00000582370 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
PDLIM1P3-201ENST00000582370 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
PDLIM1P3-201ENST00000582370 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
PDLIM1P3-201ENST00000582370 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
PDLIM1P3-201ENST00000582370 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
PDLIM1P3-201ENST00000582370 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
PDLIM1P3-201ENST00000582370 MT1EP04732 61 aa3.16□□□□□ -1.9
PDLIM1P3-201ENST00000582370 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
PDLIM1P3-201ENST00000582370 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
PDLIM1P3-201ENST00000582370 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
PDLIM1P3-201ENST00000582370 MT1GP13640 62 aa3.11□□□□□ -1.91
PDLIM1P3-201ENST00000582370 MT1LQ93083 61 aa3.07□□□□□ -1.92
PDLIM1P3-201ENST00000582370 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
PDLIM1P3-201ENST00000582370 MT1MQ8N339 61 aa3.02□□□□□ -1.93
PDLIM1P3-201ENST00000582370 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
PDLIM1P3-201ENST00000582370 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
PDLIM1P3-201ENST00000582370 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
PDLIM1P3-201ENST00000582370 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
PDLIM1P3-201ENST00000582370 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
PDLIM1P3-201ENST00000582370 LOC100996750A0A140TA64 210 aa2.91□□□□□ -1.94
PDLIM1P3-201ENST00000582370 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
PDLIM1P3-201ENST00000582370 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
PDLIM1P3-201ENST00000582370 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
PDLIM1P3-201ENST00000582370 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
PDLIM1P3-201ENST00000582370 KRTAP4-7Q9BYR0 210 aa2.83□□□□□ -1.96
PDLIM1P3-201ENST00000582370 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
PDLIM1P3-201ENST00000582370 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
PDLIM1P3-201ENST00000582370 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
PDLIM1P3-201ENST00000582370 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
PDLIM1P3-201ENST00000582370 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
PDLIM1P3-201ENST00000582370 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
PDLIM1P3-201ENST00000582370 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
PDLIM1P3-201ENST00000582370 MT1AP04731 61 aa2.65□□□□□ -1.99
PDLIM1P3-201ENST00000582370 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
PDLIM1P3-201ENST00000582370 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
PDLIM1P3-201ENST00000582370 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
PDLIM1P3-201ENST00000582370 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
PDLIM1P3-201ENST00000582370 MT3P25713 68 aa2.45□□□□□ -2.02
PDLIM1P3-201ENST00000582370 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
PDLIM1P3-201ENST00000582370 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
PDLIM1P3-201ENST00000582370 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
PDLIM1P3-201ENST00000582370 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PDLIM1P3-201ENST00000582370 INE1O15225 51 aa2.21□□□□□ -2.06
PDLIM1P3-201ENST00000582370 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
PDLIM1P3-201ENST00000582370 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
PDLIM1P3-201ENST00000582370 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
PDLIM1P3-201ENST00000582370 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
PDLIM1P3-201ENST00000582370 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
PDLIM1P3-201ENST00000582370 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PDLIM1P3-201ENST00000582370 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
PDLIM1P3-201ENST00000582370 PRM1P04553 51 aa1.74□□□□□ -2.13
PDLIM1P3-201ENST00000582370 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
PDLIM1P3-201ENST00000582370 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
PDLIM1P3-201ENST00000582370 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
PDLIM1P3-201ENST00000582370 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
PDLIM1P3-201ENST00000582370 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 34.5 ms